Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21]
319 sequences; 34,635,689 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 156 9e-33
seq285 123 5e-23
>seq2
Length=188096
Score = 156 bits (172), Expect = 9e-33
Identities = 311/452 (69%), Gaps = 18/452 (4%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | ||| ||| |||| ||||| ||||||||||||||||||||| |||
Sbjct 160510 TCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 160451
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | ||| | ||| || || || | | |||||| || |||||||| |
Sbjct 160450 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCCGCGACAAACTCGATG 160391
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | ||||||||||| | || | | || | || ||| | |
Sbjct 160390 TACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGG 160331
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC----ACCTG-TGCCAGAG 251797
|| |||| || || | || ||||| | | || || |||| ||||| | | | |
Sbjct 160330 AACTCCTGCTCAATGCCGACGGCCTCGACGATAA-TGTCTTCAACAACCTGTTTGCTGGG 160272
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCG 251856
| | ||||| ||| | ||| |||| | || || || | | |||||||||||||
Sbjct 160271 GC-GGTTGTT---CAGGTGGGAGAACAGCAGGCAAGCGAAGTCGGT-GTGCAGACCCTCG 160217
Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916
|| ||| ||||| ||||||||| | || |||||||| | ||||| ||| |||||
Sbjct 160216 TCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGC 160157
Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACA 251976
|||||||| | ||||| || ||||| | | |||||| || | | |||||
Sbjct 160156 CAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACG 160097
Query 251977 AGGCGCTCAGCAAA---CGACT---TGTCCTG 252002
|| |||| ||| || ||||| |||||||
Sbjct 160096 AGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 160065
>seq285
Length=592309
Score = 123 bits (136), Expect = 5e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||||||||| |||| |||||| || || || |||| ||||||||||| |||
Sbjct 586247 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAAC 586188
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
||| ||||| | |||||||||| | || || ||||| |||| ||||| || |
Sbjct 586187 CAGACCAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC 586128
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
||||||| ||| || ||||| ||||| |||| ||||| || || || || ||
Sbjct 586127 GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 586068
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557
|||||| | ||| || || || |||||||||
Sbjct 586067 GATGAGGTCAAGACCGTCTACGTCGAGCACGAC 586035
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205
||||| || || ||| || |||| ||||| || ||||| ||||| ||||| ||||||
Sbjct 585446 CAGGTCTCCCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCTACC 585387
Query 280206 CTAATCAAAGTCCTGACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCAT 280262
|| |||| |||||||| || ||| | || |||||| | ||| | ||||
Sbjct 585386 CTGGTCAACGTCCTGACCGGTGAGTTGATCCCCACCACTGGTGA---CGTCTACCAGCAC 585330
Query 280263 CCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTG 280322
||||| || || || ||| || |||||||||||| ||||| || ||||||||
Sbjct 585329 GAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCTCACATTGATAACCACCTC 585270
Query 280323 GACATGACTCCTAACCAATACATTCAGTGGCG 280354
|| ||||| | | ||||| ||||||||
Sbjct 585269 GATTCCACTCCCTCCGAGTACATCCAGTGGCG 585238
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/133 (76%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCC--ATTCTACTGCGTG 279759
|| || || ||||||||||||||||||||||| || | || ||| ||| | | |
Sbjct 585887 TCCCTCTCCGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTCTTCGAGTCC--C 585830
Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819
||||| |||| ||||| |||||||| ||||||||| ||||| || ||||| ||||||
Sbjct 585829 CCGATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCCTGGT 585770
Query 279820 TAGTGTCCTACCT 279832
| | | ||||||
Sbjct 585769 TGGAGAACTACCT 585757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027832599038279
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |