Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 156 9e-33 seq285 123 5e-23 >seq2 Length=188096 Score = 156 bits (172), Expect = 9e-33 Identities = 311/452 (69%), Gaps = 18/452 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| ||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 160510 TCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 160451 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || |||||||| | Sbjct 160450 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCCGCGACAAACTCGATG 160391 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||| | || | | || | || ||| | | Sbjct 160390 TACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGG 160331 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC----ACCTG-TGCCAGAG 251797 || |||| || || | || ||||| | | || || |||| ||||| | | | | Sbjct 160330 AACTCCTGCTCAATGCCGACGGCCTCGACGATAA-TGTCTTCAACAACCTGTTTGCTGGG 160272 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCG 251856 | | ||||| ||| | ||| |||| | || || || | | ||||||||||||| Sbjct 160271 GC-GGTTGTT---CAGGTGGGAGAACAGCAGGCAAGCGAAGTCGGT-GTGCAGACCCTCG 160217 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||||| ||||||||| | || |||||||| | ||||| ||| ||||| Sbjct 160216 TCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGC 160157 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACA 251976 |||||||| | ||||| || ||||| | | |||||| || | | ||||| Sbjct 160156 CAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACG 160097 Query 251977 AGGCGCTCAGCAAA---CGACT---TGTCCTG 252002 || |||| ||| || ||||| ||||||| Sbjct 160096 AGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 160065 >seq285 Length=592309 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || || |||| ||||||||||| ||| Sbjct 586247 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAAC 586188 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||| ||||| | |||||||||| | || || ||||| |||| ||||| || | Sbjct 586187 CAGACCAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC 586128 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 586127 GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 586068 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 |||||| | ||| || || || ||||||||| Sbjct 586067 GATGAGGTCAAGACCGTCTACGTCGAGCACGAC 586035 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205 ||||| || || ||| || |||| ||||| || ||||| ||||| ||||| |||||| Sbjct 585446 CAGGTCTCCCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCTACC 585387 Query 280206 CTAATCAAAGTCCTGACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCAT 280262 || |||| |||||||| || ||| | || |||||| | ||| | |||| Sbjct 585386 CTGGTCAACGTCCTGACCGGTGAGTTGATCCCCACCACTGGTGA---CGTCTACCAGCAC 585330 Query 280263 CCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTG 280322 ||||| || || || ||| || |||||||||||| ||||| || |||||||| Sbjct 585329 GAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCTCACATTGATAACCACCTC 585270 Query 280323 GACATGACTCCTAACCAATACATTCAGTGGCG 280354 || ||||| | | ||||| |||||||| Sbjct 585269 GATTCCACTCCCTCCGAGTACATCCAGTGGCG 585238 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/133 (76%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCC--ATTCTACTGCGTG 279759 || || || ||||||||||||||||||||||| || | || ||| ||| | | | Sbjct 585887 TCCCTCTCCGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTCTTCGAGTCC--C 585830 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 ||||| |||| ||||| |||||||| ||||||||| ||||| || ||||| |||||| Sbjct 585829 CCGATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCCTGGT 585770 Query 279820 TAGTGTCCTACCT 279832 | | | |||||| Sbjct 585769 TGGAGAACTACCT 585757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832599038279