Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 1e-11 >seq2 Length=188096 Score = 86.0 bits (94), Expect = 1e-11 Identities = 303/470 (64%), Gaps = 10/470 (2%) Strand=Plus/Plus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 || ||| |||||||||| || | | |||||| ||||| | || ||||| ||| Sbjct 160083 TTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTC 160142 Query 243349 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 243408 ||||||| ||||| ||| ||| | |||||||| ||| | || |||||| Sbjct 160143 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAG 160202 Query 243409 TTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTC 243468 ||||| ||| |||||||| || ||| | |||| | || ||| || | || Sbjct 160203 CTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCT- 160261 Query 243469 CAGAACAAGCTACCATTCGAAACGGTCA---AACAAATCATCACAGAAGCAGTTGAAAAC 243525 |||||| | || | || ||| || | || ||| || || || | | Sbjct 160262 --GAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATT 160319 Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCA--TGCCGGCTTATTGGCATGAACTCTGAAC 243583 || |||| ||| | |||||| | || ||| || | ||||||||||| | | Sbjct 160320 GAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCT--CTGCTGGGCATGAACTCCAAGC 160377 Query 243584 TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGA 243643 | ||| | ||||||||||| || || || |||||| | | | || || || | ||| Sbjct 160378 TGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGA 160437 Query 243644 AAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAA 243703 | |||||| ||| |||||||| | ||| |||||| || ||||| || || | Sbjct 160438 AGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGA 160497 Query 243704 CTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 | ||||||||||| ||||| || | || || || ||||||| ||| Sbjct 160498 CCAACTTCTTCGAGAAGCGGGTAGGAGACTACCAGAAGGCTGGTGTCATG 160547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875492322650