Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq59 96.9 3e-15 >seq59 Length=229715 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || |||| || ||||| |||||||||||||| || | Sbjct 32188 ACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGA 32129 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || || |||||||| || || | || || ||||||||||| || || Sbjct 32128 CAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 32069 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || ||| | ||||| Sbjct 32068 AATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 32009 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 || | || | |||||| ||||||| || || |||| Sbjct 32008 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 31971 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || ||||||||||| | || || || | ||||| | |||||| || || | Sbjct 32607 TCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAG 32548 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||||||||| || ||||| || || || ||||| || || ||| || Sbjct 32547 ATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTTA 32488 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||||| | ||||| || | || | ||||||||||| | ||| || ||| Sbjct 32487 TCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACG 32428 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 32427 AAGATCTGCAT 32417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642807666360