Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 143 3e-29 seq315 93.3 4e-14 seq285 91.5 1e-13 seq59 89.7 5e-13 seq274 84.2 2e-11 >seq2 Length=188096 Score = 143 bits (158), Expect = 3e-29 Identities = 348/525 (66%), Gaps = 29/525 (6%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| ||||| | ||||| || ||||||||| || |||| | Sbjct 160020 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAG---GACAGGGAG 160076 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || |||| | || || ||||| || ||||| | || || |||||| Sbjct 160077 TCGACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGC 160136 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 ||| || ||||||| | | || | | || | ||||| || || || ||| | Sbjct 160137 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCC 160196 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 |||||| | || || || ||||| || |||||||| ||||| || ||||| || | Sbjct 160197 AACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCC 160256 Query 52557 TAC---AAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG 52613 || || | ||| | | || | | | | |||| ||| | Sbjct 160257 CACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTC------------ 160304 Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 ||||| || | || || ||||||| | || | ||| ||||| || | ||||||||| Sbjct 160305 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGC 160364 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||| | || ||||| |||||||||||||||| ||||| || ||| ||||| Sbjct 160365 ATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCC 160424 Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTC 52792 ||| |||| | | ||||||| |||||| ||| || || || || ||| | || || Sbjct 160425 CTC-GGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTC 160483 Query 52793 GCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| | ||| ||||||||||| ||||||||||| || || || || Sbjct 160484 GCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGAGACTA 160528 >seq315 Length=240848 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 199826 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 199885 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||| || ||||| || ||||| || ||||| || | || || || | ||| Sbjct 199886 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 199944 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| || || || || || Sbjct 199945 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGAC 200003 Query 138603 AAAA 138606 ||| Sbjct 200004 GAAA 200007 >seq285 Length=592309 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 57300 GGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC 57359 || || || |||||| | ||| |||||||| ||| || | | | |||||| ||||| Sbjct 311064 GGTCTTGAAGTTGCCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGT 311005 Query 57360 GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419 ||||| |||||| ||||| ||| || || |||||||||||| || |||| ||||| Sbjct 311004 CTTGCCGAAGGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAA 310945 Query 57420 CTCGTGAACGTGAAATCC 57437 || ||| ||||| || || Sbjct 310944 CTGGTGGACGTGGAAGCC 310927 >seq59 Length=229715 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | || | | | || |||||||||||||||||||| | Sbjct 32187 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 32128 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || || || | |||| |||||||| |||||||| || Sbjct 32127 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 32068 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || || || |||| || | |||||| | ||||||| Sbjct 32067 ATGCCCTCCTTGTC-CTGAATCTTGGTCTTCACATTG-TCGATGGTGTCAGAAGACTCCA 32010 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| | || | || || || ||||| || || || Sbjct 32009 CCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 31973 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||| || ||||| ||||| | || ||||| | Sbjct 32382 GATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCG 32323 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | |||||| |||||||| || || ||||| ||||| ||| | || || |||| Sbjct 32322 AAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 32264 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||||| || || || || | || | ||| || || || ||||| || Sbjct 32263 GTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTT 32204 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 32203 GACGAAGATCTGCAT 32189 >seq274 Length=270511 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || || || | | | |||||||| || ||||||||||| Sbjct 267189 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 267130 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||||||| || ||||| | |||| |||||||| |||||||| || Sbjct 267129 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 267070 Query 138508 ATACCTTCTTTGTC 138521 ||||| || ||||| Sbjct 267069 ATACCCTCCTTGTC 267056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260421153680