Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 125 9e-24 seq74 98.7 1e-15 seq239 82.4 9e-11 >seq2 Length=188096 Score = 125 bits (138), Expect = 9e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| |||||||||||||| |||||||| || || |||||| ||||| ||||||||||| Sbjct 160229 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 160170 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | | || ||||| ||||||||||| ||||| || Sbjct 160169 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 160110 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 ||||| |||| ||||||| || |||| || | ||| | | |||||| || | Sbjct 160109 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 160051 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 |||| | ||||| || | || || ||||| Sbjct 160050 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 160020 >seq74 Length=773240 Score = 98.7 bits (108), Expect = 1e-15 Identities = 455/717 (63%), Gaps = 14/717 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||| ||||| |||||||| ||| |||||||| || || | Sbjct 275948 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 276007 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || ||||||||||| || | || | ||||||||||| ||| | || || Sbjct 276008 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 276067 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 ||||| || ||||||| || | | | | |||||||| || |||| ||| Sbjct 276068 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 276127 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 ||||| ||||| | || |||||||| | ||||| || | || ||| || | Sbjct 276128 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 276187 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGC 116201 ||||| || | | |||||||| || ||||| || || | |||| || Sbjct 276188 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 276247 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 || ||||||| | || || || | || ||| | || |||| || ||||| | Sbjct 276248 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 276306 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 116318 |||||| || |||| || || || | | || ||||| || |||| ||||| Sbjct 276307 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 276363 Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378 || | || | ||||| | | | || | || | | |||| || || || Sbjct 276364 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 276423 Query 116379 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 116435 ||||| | | ||| | | ||||| | ||| ||| | |||||||||| | Sbjct 276424 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 276480 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 || || || || || |||| ||||||| | || ||||||| || || || || || Sbjct 276481 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 276540 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 | || || || ||||| || | |||||| || || ||| |||| || ||||| Sbjct 276541 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 276600 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 |||||| ||||| | || | || ||||| || || | || |||||||| | ||| Sbjct 276601 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCA 276657 >seq239 Length=221921 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Minus Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGG--TTGATTTTCACGGGCAA 12930 ||||||| || |||||||| || ||||| | || || || | ||||| | || | Sbjct 185972 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 185916 Query 12931 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988 || | || | ||| || |||| | ||||||||| ||||||||||| ||||| | Sbjct 185915 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 185857 Query 12989 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046 | | | | ||| | || |||||| ||| ||||||||| || |||| ||| || Sbjct 185856 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 185799 Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 | ||||| || || || || |||| |||| ||||||||| ||||| ||||||| Sbjct 185798 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 185740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504753640040