Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 seq239 96.9 4e-15 seq196 86.0 7e-12 seq309 84.2 3e-11 seq22 84.2 3e-11 seq282 82.4 9e-11 >seq2 Length=188096 Score = 100 bits (110), Expect = 3e-16 Identities = 150/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||||||||| || |||| || ||||||||||| || Sbjct 160228 TGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCA 160169 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| | || || || |||||||| ||||| || Sbjct 160168 CGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCA 160109 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683 |||||||| | ||||||| ||| |||||||| | |||| || |||||| | || Sbjct 160108 GCGAAAGCAACGAGACGCTGAGC-GAAGGTCGACTCCCTGTCCTGGATCCACTTAATGGC 160050 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||| | |||||| | ||||||||||| Sbjct 160049 CCAATCGGCCTTCTTGGCAATGCAGGGGAC 160020 >seq239 Length=221921 Score = 96.9 bits (106), Expect = 4e-15 Identities = 222/327 (68%), Gaps = 8/327 (2%) Strand=Plus/Minus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGT-TGGTTGGCACGTGCCTG 11732 ||||||| ||| ||||| ||||||||||| | || || || | | | | || || | Sbjct 185972 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTC-CGCGCGTT 185914 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || ||||| || || | || ||||| || |||||||| || || | | Sbjct 185913 GGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTCCGA 185854 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || |||||||| |||||| || || |||||||| |||| || || | | Sbjct 185853 ACCACTGACACTGAA-GAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGTAACG 185795 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909 ||||||| ||||| || | ||| | |||| ||| ||||||||||| |||||||| || Sbjct 185794 TCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACCCAGCT 185735 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | |||| || || ||||| |||||| || | ||| | |||| |||| || Sbjct 185734 TC--TGGAAGCGTTCCGGGTTCTTCAGGAAGCTGACGAATTCCATGATTTCCACCTTAGC 185677 Query 11970 GGAGTCGATACCCTCAACATCGGTGAA 11996 || ||||| | || |||| ||| Sbjct 185676 TTCATCCATACCAGCCACGTCGGAGAA 185650 >seq196 Length=438949 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 6018 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 6077 Query 136776 TGGGAACAGCTTTTAGATATATTTT 136800 ||||| || ||||| | | | |||| Sbjct 6078 TGGGACCATCTTTTTGCTTTTTTTT 6102 >seq309 Length=361270 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 190603 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 190544 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 190543 TGGGACCATCTTTT 190530 >seq22 Length=63645 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 9015 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 8956 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 8955 TGGGACCATCTTTT 8942 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 9765 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 9824 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 9825 TGGGACCATCTTTT 9838 >seq282 Length=246106 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 37649 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 37708 Query 136776 TGGGAACA--GCTTTTAGATATATTTTTT 136802 ||||| || ||||| | | | |||||| Sbjct 37709 TGGGACCATCTCTTTTTGCTTTCTTTTTT 37737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973651458200