Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq59 159 8e-34 seq315 95.1 3e-14 seq274 89.7 1e-12 >seq59 Length=229715 Score = 159 bits (176), Expect = 8e-34 Identities = 163/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 ||||||||||||||||| ||||| || || ||||| |||| |||| || | ||||| || Sbjct 32397 ACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAG-GTACGGCCATCCTC 32339 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | ||||||||| |||||||| | || || ||||| || || |||||||| |||||||| Sbjct 32338 CAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTG 32279 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| ||||| ||||| ||| ||| ||||| | || | |||||| Sbjct 32278 AATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTT 32219 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | ||| || ||||| | ||||| Sbjct 32218 TCCCGTGAGAGTCTTGACGAAGATCTGCAT 32189 >seq315 Length=240848 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| || ||||||||||| ||||||||| Sbjct 199828 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 199887 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || || || || || || || || ||||| || || || ||||||||| || Sbjct 199888 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 199947 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || || | || || ||| Sbjct 199948 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 200004 Query 195130 AA 195131 || Sbjct 200005 AA 200006 >seq274 Length=270511 Score = 89.7 bits (98), Expect = 1e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| || | |||||| | || || |||||||| Sbjct 267166 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTG 267107 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||| |||||||| || || || ||||| || || || || || |||||| Sbjct 267106 CTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCT 267055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477065340673