Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq74 159 6e-34 seq2 122 2e-22 >seq74 Length=773240 Score = 159 bits (176), Expect = 6e-34 Identities = 374/557 (67%), Gaps = 12/557 (2%) Strand=Plus/Plus Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004 ||||| ||| |||| |||||||| | || ||| ||| || | ||| || Sbjct 276762 TAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAG 276821 Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 | |||| |||||| ||| | | || | || |||||| || ||||| ||||||| Sbjct 276822 AACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGG 276881 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 || | || ||||| | || | ||| ||||||| |||| ||| || | || |||| Sbjct 276882 GCATAGAACAGATCGCGGG--CTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCA 276939 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| || | || | |||||| ||||| || |||| ||| | ||| ||||| |||| Sbjct 276940 GGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCT 276999 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACC 222241 ||||||||||||| || || || ||| | |||||| | ||||| | || || Sbjct 277000 TGTTGCCACCCTGGTCAACGTATCT-GGCAGTGTTGTTGAAAACCCGAAGCATGGGAACA 277058 Query 222242 AGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG 222301 || |||||||| |||||||||||| |||||| | ||| | | || | | | Sbjct 277059 AGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGC---GGATGCGG 277115 Query 222302 -GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358 ||| || || |||||||||||| || |||||||| ||||| |||| | |||| Sbjct 277116 TGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTG 277175 Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA 222418 || ||| || || || ||||||||| | || | || || ||||| | | |||| Sbjct 277176 TCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGA 277235 Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | | || | || ||||| ||||| || || |||||| || ||||| | ||| Sbjct 277236 GGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGAC 277295 Query 222479 ATCAGATCGTACGTCTC 222495 |||| | ||| ||||| Sbjct 277296 ATCAAGTGGTAGGTCTC 277312 >seq2 Length=188096 Score = 122 bits (134), Expect = 2e-22 Identities = 326/499 (65%), Gaps = 25/499 (5%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||||| ||||||||| | | ||| | | | || || | |||| || || || || Sbjct 160047 TGGGCCATTAAGTGGATCCAG-GACAGGGAGTCGACCTTCGCTCAGCGTCTCGTTGCTTT 160105 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||||| || ||||| ||||| ||| ||| || || || ||||||||||||||||| | Sbjct 160106 CGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAA 160165 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || |||||| || || ||| ||||||||||||||| | ||||||||||| Sbjct 160166 GCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCT 160225 Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGA 26072 |||| || || || |||||||| | | | |||| || | |||| | || | Sbjct 160226 GCACACCGACTTCGCTTGCCTGCTGTTCTC---CCACCTG----AACAACCGCCCCAGCA 160278 Query 26073 GACCGTCT-------ACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 || | | ||| |||| || ||||| || | || ||| ||||||| | Sbjct 160279 AACAGGTTGTTGAAGACATTATCGTC---GAGGCCGTCGGCATTGAGCAGGAGTTCCTGA 160335 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185 ||||||||||| || || ||| | || ||||| | Sbjct 160336 CTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCG 160395 Query 26186 AGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC-- 26242 ||| ||| || |||| ||||| ||| | || || | | ||||| |||| Sbjct 160396 AGTTTGTCGCGGACCGCCTGCTGGTGGC-CCTCGGCAACAAGAAGTACTACA--ACGCCA 160452 Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302 | ||||| |||||||| ||||| || ||| ||| || |||||||||||||| || | Sbjct 160453 CCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGA 160512 Query 26303 AGAGGGTCGGCGACTATCA 26321 || |||| || ||||| || Sbjct 160513 AGCGGGTAGGAGACTACCA 160531 Score = 93.3 bits (102), Expect = 8e-14 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || |||||||||||| || || |||||| Sbjct 159634 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTG 159693 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| || ||| |||| | ||| || | | ||||||| | || || Sbjct 159694 TCCAAGGATTTGCACGACTGGCACAACCGC-CTGAACGACGACGAGCGCTACTTCATCTC 159752 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || ||||| ||||| || || |||||||| || |||| | Sbjct 159753 CCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCG 159812 Query 25653 ATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || || || | | ||||| || |||||||| |||||||| Sbjct 159813 CTTCAGCGGCGAGGTCCAGGTTCCT-GAGGCTCGTTGCTTCTACGGATTCCAGAT 159866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841096231360