Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 145 1e-28 seq74 107 3e-17 seq297 104 4e-16 >seq2 Length=188096 Score = 145 bits (160), Expect = 1e-28 Identities = 182/250 (73%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||||||||| ||| | | Sbjct 160545 TGACACCAGCCTTCTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCA 160486 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 160485 GCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGA 160426 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| ||||| || || |||||||| ||||| || || ||||| Sbjct 160425 GGGCCACCAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCA 160366 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || |||||||| | || | | ||||| | ||| || ||||||||| Sbjct 160365 TGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCT 160306 Query 794131 CGATGATGAT 794140 ||| ||| || Sbjct 160305 CGACGATAAT 160296 Score = 105 bits (116), Expect = 1e-16 Identities = 140/192 (73%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| ||| ||| || |||||||| || ||||| Sbjct 160223 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTT 160164 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| | ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 160163 CTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAA 160104 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||| |||| || || ||| | |||| | | ||||||||| || ||||| Sbjct 160103 AGCAACGAGACGCTGAGCGAA--GGTCGACTCCCT-GTCCTGGATCCACTTAATGGCCCA 160047 Query 794520 CTCTGCCTTTTT 794531 || ||||| || Sbjct 160046 ATCGGCCTTCTT 160035 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| |||||| ||||| ||||| ||||||||||| ||||||||||| || || Sbjct 159929 GGCTCCTTGATGTAGGTATCGATCAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATC 159870 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||| || || ||||| Sbjct 159869 ATGATCTGGAATCCGTAGAAGCA 159847 >seq74 Length=773240 Score = 107 bits (118), Expect = 3e-17 Identities = 172/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 2071766 AGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAA 2071825 |||||||||| || || | |||| | || || ||| || || ||| ||||| | Sbjct 276763 AGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGA 276822 Query 2071826 AGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGC 2071885 | || | |||||||||| | | | || || ||| ||||| || ||||||||| Sbjct 276823 ACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGG 276882 Query 2071886 CGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCC 2071945 | || || |||||||| || | | ||||||||| ||||||||||| ||||| || Sbjct 276883 CATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGA 276942 Query 2071946 AGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGC 2072005 | |||| || || | |||||| ||||| |||||| |||||| || || |||||| Sbjct 276943 ACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGT 277002 Query 2072006 CGCCGCC 2072012 ||| || Sbjct 277003 TGCCACC 277009 Score = 93.3 bits (102), Expect = 7e-13 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| ||| || || || |||||||| ||||| |||||||| Sbjct 277010 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 277069 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| | | ||| | || | | ||| | |||| || | || Sbjct 277070 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 277129 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||| | ||||||||| | ||||| | |||| || |||||||| || || Sbjct 277130 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 277189 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755 || ||| |||||||||| | || ||||| || Sbjct 277190 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGA 277225 >seq297 Length=460255 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| |||||||||||||| ||| || || || | || ||||| ||||| || ||| Sbjct 281215 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAAC 281156 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || || || |||||||||||||| |||||| || ||| Sbjct 281155 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 281101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916212466515041