Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 179 4e-40 seq74 140 3e-28 seq285 125 7e-24 seq59 113 4e-20 >seq2 Length=188096 Score = 179 bits (198), Expect = 4e-40 Identities = 345/505 (68%), Gaps = 9/505 (2%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || || ||| ||| ||| || | Sbjct 160532 CTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 160473 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | || ||||| Sbjct 160472 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 160413 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 |||||||| |||||||| ||||||| ||||| || | |||||||||||||| || Sbjct 160412 GCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGC 160353 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || |||| || || | ||||||| ||||||| | || ||||| || ||| | Sbjct 160352 AACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATAATGTC 160293 Query 120591 --GAGCATAGTG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 | || || | || ||| |||| | | || | | | | |||||| || Sbjct 160292 TTCAACAACCTGTTTGCTGGGGCGGTTGT-TCAGGTGGGAGAACAG-----CAGGCAAGC 160239 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 ||||| |||||||| |||||||| || || || ||||||||| || || || || || Sbjct 160238 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGG 160179 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| || | |||||| |||| |||| || ||| ||| || ||||| | || Sbjct 160178 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACC 160119 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 ||| ||| || || || || | |||| || || |||| | | || | |||||| Sbjct 160118 CTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTGGATCCA 160059 Query 120828 CTTCATGGCCCACTCGGCCTTTTTG 120852 ||| |||||||| |||||||| ||| Sbjct 160058 CTTAATGGCCCAATCGGCCTTCTTG 160034 >seq74 Length=773240 Score = 140 bits (154), Expect = 3e-28 Identities = 592/922 (64%), Gaps = 26/922 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 ||||| ||||||||||||||| |||||||| || ||||| | | || || |||| Sbjct 275702 GACTGAGACTGGTCAATGAACGCACCACGGTCCGCTGCCATCTGCAGGATCGTCCGCT-- 275759 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 |||||||| |||||||||||||| |||||| | | ||| ||| | |||| Sbjct 275760 -GGGAGATCTCCCACACCGTCTTGTACAGCGCCTTGATGTCACTGGGGATGTTGGGGATG 275818 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| || || || | | |||| || | || ||| | ||||| | ||| | Sbjct 275819 TTCTGGACGGAACCACCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCG 275878 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || |||| |||||| | | ||| | | || |||||||| ||||| || || | || Sbjct 275879 AGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACCACCTGGAACTCACCAGCCAAGACA 275938 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || || | |||| || | || || || |||||||| |||||| ||||| Sbjct 275939 CGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGA 275998 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 ||| | || ||||||||| || ||||||| |||||| | ||| | Sbjct 275999 CTGGTACTGGCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCG 276058 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || ||| ||| ||||| |||||||||||||| | || || || |||||||||| Sbjct 276059 ATCTTGGCCTTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCG 276118 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||| || || || || | || |||||||| | ||| | |||| | || Sbjct 276119 TACTGAAGGATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCC 276178 Query 148530 GCCGCCAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 || || ||| | || || | | | ||| || || |||||| || || | Sbjct 276179 TTGGCGAGATCGGACGAGGCGGTCAAAC-CAGCGTGATAGATGGTCTCGAAGATCTGGAT 276237 Query 148589 GTTGAGCAG---CGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||| ||| | ||| | | | | ||| | |||| || || | || || || Sbjct 276238 GTTCAGCTGTCTGGCCTCGGCCGAG---TCGAAGGGCAGGCGGAGAGCGAGGAAAGCATC 276294 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 || || || | || |||| ||||||| ||||| | |||||| || Sbjct 276295 AGCCAGACCGTTGACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGCCTC 276354 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG 148764 | || || |||| |||| ||||||||||||| ||||| || || |||| |||| Sbjct 276355 CGGGACGGGGTAGTAGTTGATGTCGATGATCTTGTTCAAG-TTACGGACCAAGACCTGGA 276413 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCG------GT--T 148816 | | | ||| |||| || |||| | | | | | |||||| || Sbjct 276414 CGACCTCGTGGAGCTTGCCAAAGTCATACTCG-CCGCGA-GCAGCATCGACGAAAGTAGG 276471 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 | ||| | |||||| || ||||| || || ||||||||| || |||||||| | ||| Sbjct 276472 AAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGAT 276531 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 ||| | ||| || ||| || ||| || | |||||| || |||||||| |||| Sbjct 276532 CTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTT 276591 Query 148937 GCACGCGTCCTTGTACAGCATG 148958 ||| || ||||||||||||||| Sbjct 276592 GCAAGCATCCTTGTACAGCATG 276613 >seq285 Length=592309 Score = 125 bits (138), Expect = 7e-24 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||||| ||| |||| || |||| || |||||||||||||||||| ||| ||| Sbjct 310927 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 310986 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| |||| || |||||| || ||| | | || || ||||||||||||||| Sbjct 310987 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCACGTCGGTGAC 311046 Query 116596 CTGGGCAAC 116604 || |||||| Sbjct 311047 CTTGGCAAC 311055 >seq59 Length=229715 Score = 113 bits (124), Expect = 4e-20 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | | |||| | | | ||||| |||||||| || Sbjct 31856 GTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCA-TCCTCCAGCTGCTTTCC 31798 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||||||||||||||| ||||| || |||||| ||| Sbjct 31797 GGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTT 31738 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || ||| ||| ||| || |||| ||||| ||| |||||||| Sbjct 31737 GACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 31684 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| || || | | | ||||| | |||||| || Sbjct 32385 GTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCCTCCAACTGCTTACC 32327 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || ||||||||||||||||| ||||| ||| Sbjct 32326 AGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGGTCTT 32267 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| | || || || | |||| || || || || ||||| Sbjct 32266 AACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGT 32207 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 32206 CTTGACGAAGATCTGCAT 32189 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||||||| | ||| | | | || || | |||||| || ||| Sbjct 32608 CTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCA-TCTTCCAACTGCTTACCAGCGA 32550 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | ||||| ||||||||||| || || ||||| ||||| || ||||| ||||| | Sbjct 32549 AGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGT 32490 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| || || | | |||||| || | || | || |||||||| ||||| || | Sbjct 32489 TATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCA 32430 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 32429 CGAAGATCTGCAT 32417 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || ||| | || || ||||||||||| || || ||||| |||||| Sbjct 32115 TCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 32056 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||| | | || | ||||| | | |||||| || | ||||| | Sbjct 32055 TCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATG 31996 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || || |||||||| || || |||| Sbjct 31995 GTCTTTCCGGTCAGGGTCTTGACGA 31971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418872359560