Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21]
319 sequences; 34,635,689 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 179 5e-39
seq74 109 8e-18
seq81 87.8 3e-11
>seq2
Length=188096
Score = 179 bits (198), Expect = 5e-39
Identities = 222/299 (74%), Gaps = 5/299 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| || || |||||||||||||| |||| |
Sbjct 159633 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATC 159691
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
| | || | | ||||| ||| ||| ||||||||||||| | ||||||
Sbjct 159692 TGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCT 159751
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||||| ||||| || || ||| ||| ||||||||| || ||||||||| | ||
Sbjct 159752 CCCACGTTCTCGCGTTCTT-CGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAG 159810
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | |||||||| | || ||||| |||| || ||||| |||||||||
Sbjct 159811 CGCTTCAGCGGCGAGGTCCAGGTTCCTGAGGCTCGTTGCTTCTACGGATTCCAGATCATG 159870
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
|| || ||||||||||| || |||||||| ||||||||||| |||||| ||||||| ||
Sbjct 159871 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTGATCGATACCTACATCAAGGAGCC 159929
Score = 147 bits (162), Expect = 3e-29
Identities = 191/259 (74%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|| |||||||||||||||| || ||| | ||||| | | || | ||||| || ||
Sbjct 160296 ATTATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCT 160355
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | ||||||||| ||| ||| ||||| |||||||| || ||| ||||| |||||||
Sbjct 160356 CTGCTGGGCATGAACTCCAA-GCTGATGTGTCAGTACATCGAGTTT-GTCGCGGACCGCC 160413
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||| | ||| |||||| | ||||| ||||| | ||||||| ||| | |||
Sbjct 160414 TGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATG 160472
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|||| ||||||||| | ||| ||||||||||| |||||| || || || || |||
Sbjct 160473 GAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGAGACTACCAG 160532
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
||||| || |||| ||||
Sbjct 160533 AAGGCTGGTGTCATGGCCA 160551
Score = 104 bits (114), Expect = 3e-16
Identities = 139/188 (74%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
|| |||||||| ||||| || ||||||||| | | |||| ||||| ||| || |||
Sbjct 160035 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGAC-AGGGAGTCGAC-CTTCGCTCAGC 160092
Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241
| ||||| | || || || || ||||| ||||| ||||| ||| ||| ||||||
Sbjct 160093 GTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCT 160152
Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGT 1456301
| |||||||||||||| || |||||||| |||| || ||| |||||| | ||| |
Sbjct 160153 TCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTC-TCACCTTCTCCAACGAGCTCATCTCT 160211
Query 1456302 CGCGACGA 1456309
|| |||||
Sbjct 160212 CGTGACGA 160219
>seq74
Length=773240
Score = 109 bits (120), Expect = 8e-18
Identities = 199/289 (69%), Gaps = 2/289 (1%)
Strand=Plus/Minus
Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
||||| ||| ||| ||||| ||| || | || || || || || || || || || |
Sbjct 277297 ATGTCCCAGAAGTACTTCAC-TCACGCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCA 277239
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
|| ||| | | || ||||| || | |||||||||| || || || || |||||
Sbjct 277238 GCCTCAGCTTGCCTCTTGCTTCCTCGTCGACATGAAGGAGGACAGCATTGACGGTATCTA 277179
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
||||| | ||| ||||| | ||||||||| | ||||| || || ||| | ||
Sbjct 277178 CGACACTTTGAAGACTTGCGCTATGATCTCCAAGACCGCCGGTGGTATTGGTCTGAACGT 277119
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
||| | ||| | | || | ||| | | ||||||||||| |||||||| ||
Sbjct 277118 GCACCGCATCCGCTCTACCGGATCTTACATTGGTGGCACCAACGGTACCTCCAACGGTCT 277059
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
||| ||||||||||| ||||| ||| |||| || | ||||| ||||||
Sbjct 277058 TGTTCCCATGCTTCGGGTTTTCAACAACACTGCCAGATACGTTGACCAG 277010
>seq81
Length=159071
Score = 87.8 bits (96), Expect = 3e-11
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
|||||||| ||||| |||||||||||| |||||| ||||| ||| |||| |||| |||
Sbjct 35745 GGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTGGCCTCGGGTCTG 35804
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGC 165863
| | ||| |||| ||||| ||| | |||||||||
Sbjct 35805 TCCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGC 35840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177780431863678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |