Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq74 140 4e-28 seq2 100 4e-16 >seq74 Length=773240 Score = 140 bits (154), Expect = 4e-28 Identities = 469/723 (65%), Gaps = 8/723 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||| || || || | |||||| |||| ||||| ||| || || || | || | | Sbjct 276771 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 276830 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || | | | ||| ||| || ||||| || ||||| ||| |||| || || ||| || Sbjct 276831 CAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGC-ATAGAA 276889 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 ||||| | || ||| || || || || || || || || || ||||| | Sbjct 276890 CAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGAA 276949 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 | ||| || ||||| || || || || || || | | || || || || || || || Sbjct 276950 GACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACC 277009 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| || | ||||||||||||||| || | || | ||||| |||| || ||| || || Sbjct 277010 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 277069 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACC 69875 |||| || || ||| ||| ||| ||| | | ||| || | ||||| Sbjct 277070 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 277129 Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935 || || || || | || ||||| | ||| ||| ||||| ||||| || ||||| || Sbjct 277130 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 277189 Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCC 69995 ||||| || || |||||| | || || || | | ||| | || ||| || Sbjct 277190 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACC 277249 Query 69996 CGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT 70055 || || || | || || || ||||||||||| | || | || | || | ||| || Sbjct 277250 AGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 277309 Query 70056 TTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATAT 70114 || || || || || || | || | || || || | || |||||||||| || | Sbjct 277310 CTCGATGGCCTTCTCGATGTCACTACCG-TGGATACCAACGGCAACACGCATCAGCAGGT 277368 Query 70115 GCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTT 70174 |||| || || || || || || || |||||||||||| ||||| || | Sbjct 277369 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAGGGTCT 277428 Query 70175 TAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTT 70232 | || || || ||||||| ||||| || | ||||| | |||| | || || || | Sbjct 277429 TGAAGCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTAAGCTC 277486 Query 70233 ATC 70235 ||| Sbjct 277487 ATC 277489 >seq2 Length=188096 Score = 100 bits (110), Expect = 4e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | ||| |||||||| || || ||||| || | | || | ||||| || Sbjct 160252 AACAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 160193 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || ||||| |||||||| ||||||||||| |||||||| || |||| ||| || || || Sbjct 160192 AAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCG 160133 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || |||||||| || || || || || || ||||| || Sbjct 160132 GAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAG 160095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906060951160