Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 134 2e-26 seq74 129 7e-25 seq239 82.4 9e-11 >seq2 Length=188096 Score = 134 bits (148), Expect = 2e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||||||||| |||||||| || || |||||| ||||| ||||||||||| Sbjct 160229 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 160170 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | | || ||||| ||||||||||| ||||| || Sbjct 160169 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 160110 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 130205 ||||| |||| |||||||| ||| |||| || | ||| | | |||||| || | Sbjct 160109 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 160051 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 |||| | ||||| || | || || ||||| Sbjct 160050 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 160020 >seq74 Length=773240 Score = 129 bits (142), Expect = 7e-25 Identities = 367/561 (65%), Gaps = 5/561 (1%) Strand=Plus/Plus Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997 ||||| ||||||||| || ||||| ||||| | | || | | || || || | Sbjct 276753 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 276812 Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057 | |||||||| |||| ||| | || | ||||||| ||||||||||| || || || Sbjct 276813 TTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGA 276872 Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117 |||| || || |||| ||||| || | | || || | || || || ||| Sbjct 276873 GTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGG 276932 Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177 | |||| || || | || ||||| |||||| || || ||||| | || | | || Sbjct 276933 AGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCG 276992 Query 119178 TTACGACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234 ||| ||| |||||| || || || |||||| ||| || || |||||||| Sbjct 276993 GGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATG 277052 Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACA 119294 |||| | ||| | ||| || || || || | ||| ||| | | | || Sbjct 277053 GGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATG 277112 Query 119295 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 119354 ||| | || || ||||||||| || || ||| ||||| ||||| | | | | Sbjct 277113 CGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAA 277172 Query 119355 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 119414 || ||||||| || || || ||| |||| | ||| ||||||||| | | Sbjct 277173 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGC 277232 Query 119415 TGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TG 119473 |||||| ||| |||||||||||||| ||||| || | ||||| |||| ||| | || Sbjct 277233 TGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTCTG 277291 Query 119474 GGACATCTTGTCGTAGGTCTC 119494 ||||||| || ||||||||| Sbjct 277292 GGACATCAAGTGGTAGGTCTC 277312 Score = 111 bits (122), Expect = 2e-19 Identities = 459/719 (64%), Gaps = 14/719 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| ||||| |||||||| ||| |||||||| || || | Sbjct 275948 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 276007 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || ||||||||||| || | || | |||||| |||| ||| | | || || Sbjct 276008 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 276067 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361 |||||||| ||||||| || | | | | | |||||| || |||| ||| Sbjct 276068 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 276127 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421 ||||| ||||| | || |||||||| | ||||| || | || ||| || | Sbjct 276128 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 276187 Query 118422 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGC 118480 ||||| || | | |||||||| || || || || || | |||| || Sbjct 276188 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 276247 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 || ||||||| | || || || | || ||| | || |||| || ||||| | Sbjct 276248 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 276306 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGG 118597 |||||| || |||| || || || | | || |||||| || |||| ||||| Sbjct 276307 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 276363 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 || | || | ||||| | | | || | || | | |||| || || || Sbjct 276364 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 276423 Query 118658 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714 ||||| | | ||| | | ||||| | ||| ||| | |||||||||| | Sbjct 276424 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 276480 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || || || || || |||| ||||||| | || ||||||| || || || ||||| Sbjct 276481 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 276540 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 | ||| || || ||||| || | |||||| || || ||| |||| || ||||| Sbjct 276541 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 276600 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893 |||||| |||||| | || | || ||||| || || | || |||||||| | ||||| Sbjct 276601 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGA 276659 >seq239 Length=221921 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Minus Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG--TTGATTTTCACGGGCAA 14291 ||||||| || ||||||||||||||||| | || || || | ||||| | || | Sbjct 185972 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 185916 Query 14292 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 14349 || | || | ||| || |||| | ||||||||| ||||||||||| ||||| | Sbjct 185915 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 185857 Query 14350 GG--CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGG 14407 | | | | ||| | || |||||| ||| |||||||| || |||| ||| || Sbjct 185856 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 185799 Query 14408 AGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 | ||||| || || || || || | |||| ||||||||| ||||| ||||||| Sbjct 185798 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 185740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432733989640