Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq46 203 1e-46 seq317 149 2e-30 seq59 141 3e-28 seq305 91.5 4e-13 >seq46 Length=113367 Score = 203 bits (224), Expect = 1e-46 Identities = 592/906 (65%), Gaps = 13/906 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || |||||||| || || || || || ||||| | ||| | | |||| | Sbjct 92840 CCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 92781 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || || || || || |||||| | || || || || | ||| || || | Sbjct 92780 GCATTGAAATCATCGCCAACGACCAGGGTAACCGCACTACCCCCTCTTTCGTGGCTTTCA 92721 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 92720 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACA 92661 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||||||||| || || ||| | ||||| | ||| | || Sbjct 92660 ACACCGTCTTCGATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTC---- 92605 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || ||||| | || || | || || | ||||| | | ||| |||| || || || Sbjct 92604 CAGTCTGACATGAAGCACTGGCCCTTCAAGGTTGT-CGAGAAG--GGTGGCAAGCCCATC 92548 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 | |||||||| | || || || || || || ||||| || | || || ||| Sbjct 92547 GTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGGTCTCCTCCATG 92488 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || ||| || | ||||| || || | |||| || || | | ||| Sbjct 92487 ATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCTCGGTGGCACCGTCAACAACGCT 92428 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || | |||||| || || || |||||||| Sbjct 92427 GTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGT 92368 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| | || || || || ||||| ||||| || ||||| Sbjct 92367 CTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCC 92308 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || || | || || || ||| | |||||| Sbjct 92307 TACGGTCTGGACAAGAAGGCCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGTGGT 92248 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || | || ||||| || || || || || || || Sbjct 92247 GGTACCTTCGATGTCTCCCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACC 92188 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || | ||||| || || || || || || ||||| || || || Sbjct 92187 GCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTC 92128 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | || | || || | || | ||||| Sbjct 92127 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCTCACCTCCAACGCTCGTGCTCTCCGTCG 92069 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || || || ||||| |||||| || | || || || |||| ||||| || Sbjct 92068 TCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCCAT 92009 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||| || || ||||| || || | || |||| | || || || |||||||| || Sbjct 92008 TGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTT 91949 Query 350092 TGAAGA 350097 || || Sbjct 91948 CGAGGA 91943 >seq317 Length=62423 Score = 149 bits (164), Expect = 2e-30 Identities = 337/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || || ||||| || || |||||| || || || |||||| Sbjct 15165 GCAGTCATCACCGTGCCCGCTTATTTCAACGACAACCAGCGCCAGGCTACTAAGGATGCT 15224 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || |||||||| ||||||||| Sbjct 15225 GGTGCCATTGCTGGTCTCAACGTGCTCCGTATCATCAACGAGCCCACTGCAGCAGCAATT 15284 Query 349730 GCATATGGGCTTGATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| |||| | | ||| | || || ||||||| | ||| | Sbjct 15285 GCTTATGGCCTTGGCTCCGGCAAGTCTGATAAGGAGCGTAACGTTCTTATCTACGATCTT 15344 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || |||| | ||| || | || ||||| Sbjct 15345 GGTGGTGGTACTTTCGATGTGTCTCTCCTTAACA-TCCAAGGTGGTGTCTTCACTGTTAA 15403 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||| || ||||| || ||||||||| |||| ||||||| ||| | || Sbjct 15404 GGCTACTGCCGGAGATACCCACCTTGGTGGACAAGACTTTGATACCAACCTCCTGGACCA 15463 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT---TGGAGATAATCCTAGAG 349961 || || || || |||| |||| || | || | |||||| | |||| Sbjct 15464 CTTCAAGAAGGAGTTCCAGCG-CAAGACTGGCAAGGACCTCTCTGGAGACG---CGAGAG 15519 Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021 | | |||||||| ||||| || || || |||||||||||| | || || |||||| Sbjct 15520 CCCTCCGTCGCCTCAGAACCGCTTGCGAGCGTGCTAAGCGTACTTTGTCCAACGCTACCC 15579 Query 350022 AAACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACA 350080 | ||| || | ||||| || ||| ||| | |||||| | || ||| ||| || || || Sbjct 15580 AGACCACTGTGGAAATCGACTCT-TTGTTCGATGGCGAGGACTTCAATTCCTCCATCACC 15638 Query 350081 CGTGCTCGGTTTGAAGA 350097 |||||||| |||||||| Sbjct 15639 CGTGCTCGCTTTGAAGA 15655 >seq59 Length=229715 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| || ||||| || || || || || Sbjct 32419 CATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTC 32360 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || | || || ||||| ||||| | ||| ||||| || || Sbjct 32359 GGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGG 32300 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || ||||| || | || || |||||||| | || || | ||| Sbjct 32299 GGGGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTC 32240 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| | ||| | |||||||| || || || || || || |||||||| Sbjct 32239 AACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 32189 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || || || |||||||| || || || Sbjct 32191 CATACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTC 32132 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || |||||||| ||||| ||||| ||||| || || Sbjct 32131 AGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGG 32072 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || ||||| || || | ||||| | || Sbjct 32071 GGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTC 32012 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || ||||| || | ||||||||||| || || || || Sbjct 32011 CACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 31973 Score = 111 bits (122), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| ||||||||||| || || || || || || Sbjct 31890 CATACCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 31831 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || ||||| || || || ||||| || ||||| ||||| ||||| || || Sbjct 31830 ACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGG 31771 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || |||||||| || || | || || || || || | ||| | ||| | Sbjct 31770 AGGGATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATC-GCTGGACT 31712 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || | ||||| ||||| Sbjct 31711 CGACCTCGAGGGTGATGGTCTTGCCGGT 31684 >seq305 Length=426760 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 |||||||||||||||||||| || || || | || || | ||||||||||| ||||| Sbjct 199373 ACACCAGCAAAGTGGAAAGTGTTGAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGA 199432 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || |||| || ||||||||||| ||||| ||| || ||||| Sbjct 199433 GCAGCAAGCACACCAACCATTTCACCAGGGTTGGCACCAGCCT 199475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515248206871157