Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq59 190 2e-43 seq2 141 1e-28 seq315 123 3e-23 seq274 104 3e-17 seq74 89.7 6e-13 >seq59 Length=229715 Score = 190 bits (210), Expect = 2e-43 Identities = 171/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| || || |||||||| ||||| ||| | ||| | Sbjct 31973 GTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGAC 32032 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| ||||| | || ||||||||||||||||| ||||| || |||||||||||||| || Sbjct 32033 AATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATC 32092 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| ||||| || ||||||| |||||||| | ||||| || | ||||||||| Sbjct 32093 TTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAA 32152 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| ||||| || ||| | ||||| || ||||| Sbjct 32153 TCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 32187 Score = 158 bits (174), Expect = 1e-33 Identities = 174/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| |||||||||||||| ||||| || ||||| ||| || | Sbjct 32417 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAG--AGCT 32474 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| || | ||| |||| ||||| || |||||||| ||||| || |||| Sbjct 32475 CGGATACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACC 32534 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| | || |||| ||||| || | || || | Sbjct 32535 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACA 32594 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| |||||| || || || | ||||| || || ||| Sbjct 32595 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTGGCGGA 32644 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || | || ||||| || Sbjct 32189 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 32248 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || ||||| |||||||| || || || || |||||| Sbjct 32249 GACACAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAG 32308 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||||||||| | ||||||| |||||| | | ||||| || Sbjct 32309 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAAC 32368 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||||||||| || ||| | ||||| || ||||| Sbjct 32369 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGG 32415 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| | |||| ||| | || | ||| | Sbjct 31684 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGACC 31743 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| |||||||| || ||||| |||||||||||||| || || || || ||| Sbjct 31744 AAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAG 31803 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| || || || ||||| || |||| ||||| || ||||| ||| Sbjct 31804 CAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCAT 31863 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 31864 CTTGTCCTCCGCCTGCGTGGTGG 31886 >seq2 Length=188096 Score = 141 bits (156), Expect = 1e-28 Identities = 336/501 (67%), Gaps = 15/501 (3%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| || |||||||| |||||| | | | | |||| | || | ||||||| Sbjct 160035 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 160094 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 |||| ||||| || || || || || ||||| || || || ||| ||| || ||| Sbjct 160095 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTC 160154 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| || || ||||| ||||| | || || |||||||| |||||||| Sbjct 160155 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 160214 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGA-CAAA 64896 |||||||| || ||| || || || || || |||||| |||||| || | | Sbjct 160215 GACGAGGGTCTGCACACCGACTT--CGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCC 160272 Query 64897 CCATCACATGGGACTATAATTG-ATATAGTAAAATC--GGCTGTAGAAATTGAAAAGGAA 64953 ||| || | || | ||| | | | || || ||| || | ||||| |||| Sbjct 160273 CCAGCAAACAGG----TTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAGGAG 160328 Query 64954 TTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAG 65013 ||| | |||| ||| || || | ||| | |||||| | || | |||| ||| Sbjct 160329 TTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAG 160388 Query 65014 TATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAAT 65073 || ||||| ||||| || || |||||||| | || | ||| |||| || Sbjct 160389 TACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAAC 160448 Query 65074 TCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTT 65133 | | || || || |||| |||||| ||||| |||| ||| ||||| ||||| || Sbjct 160449 GCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTC 160508 Query 65134 GAAAAGAGGGTAGGTGATTAC 65154 || ||| ||||||| || ||| Sbjct 160509 GAGAAGCGGGTAGGAGACTAC 160529 >seq315 Length=240848 Score = 123 bits (136), Expect = 3e-23 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 200006 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 199947 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| || || || || ||||||||||| Sbjct 199946 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCTT 199887 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 199886 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 199828 Query 27594 GGAAT 27598 || || Sbjct 199827 GGTAT 199823 >seq274 Length=270511 Score = 104 bits (114), Expect = 3e-17 Identities = 107/139 (77%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||| |||||||||| || || || |||||||||||||| || || ||||||||||| | Sbjct 267052 TTCAG-ACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGC 267110 Query 27554 TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613 ||||||| | ||||| || | ||||| || |||| ||||| ||||| || || | | Sbjct 267111 TCGAGGACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGG 267170 Query 27614 TCTTGCGTCTTCGCGGTGG 27632 | | || || || ||||| Sbjct 267171 TGCTCCGCCTGCGTGGTGG 267189 >seq74 Length=773240 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096 ||| ||||| |||||||| |||||||| || ||| ||||||||||| | |||||| Sbjct 275599 CGTGCGCAGGTAGTACATACCCGTCTTCAGACCCATCTTCCAGCCGGCAAAGTGCATGCT 275658 Query 80097 ACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 ||| ||| | | ||||| | || || | |||||| || ||||||||||| || Sbjct 275659 GGTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAAT 275718 Query 80157 GAAAGCCCCACGATCTGCCGCCAT 80180 ||| || ||||| || || ||||| Sbjct 275719 GAACGCACCACGGTCCGCTGCCAT 275742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308125887280