Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq21 82.4 6e-11 >seq21 Length=173986 Score = 82.4 bits (90), Expect = 6e-11 Identities = 184/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Plus Query 30190 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATG 30249 |||||| || ||| || ||||| || | | | ||| || || || |||||||| Sbjct 165616 CTGATCGACACCCTGACCAGAGTAATCCGTCTTGGCGTCGACATATTCCGCCCCGAAATG 165675 Query 30250 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 30309 ||||||||||| |||||||| || || ||||| || |||| | |||| ||| || Sbjct 165676 TCTCCACTGGAAGCCGTACACGGGACCGAGGTCGCCGACTTCGCGGTGC-GAAAGACCGA 165734 Query 30310 C-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCAGA 30366 | ||||| | | || | ||| || ||| | |||||||| || | ||| |||| | || Sbjct 165735 CTTTGTCGAGGTATTCGCGGGAGCCATTGCCATCCCAGATTTTGATCCCGGCTTCGCTGA 165794 Query 30367 -GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 30425 | || |||| | ||| || || |||||| || || || | | |||||| Sbjct 165795 GGGGCAGGGAGGAGGTCGTG---CCGGAGATGAACCAGAGGAGTTCGGCGAGGACGGCGC 165851 Query 30426 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||||| | |||||| ||||||||||| Sbjct 165852 GCAGGAAGACGCGCTTGGTGGTGAGGAGGGG 165882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308820341348