Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741885.1_202016-09-21] 319 sequences; 34,635,689 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq59 143 2e-29 seq315 111 1e-19 seq274 105 6e-18 >seq59 Length=229715 Score = 143 bits (158), Expect = 2e-29 Identities = 174/232 (75%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | |||||| ||||| |||||||||||||| ||||| || |||||| Sbjct 32643 CCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAG 32584 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || | |||||| || ||||| || || ||||| ||||||| |||| Sbjct 32583 AGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGA 32524 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACA-CAGTGTCGCTCGA---CT 41810 | || |||||| | | ||| | || | ||| |||| | || || ||| || Sbjct 32523 ATGCCCTCCTTAT-CTTGAATCTTAGTCTT----GACGTTATCAATGGTATCCGAGCTCT 32469 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||| ||| ||||| || || || || ||||| ||||| |||||||| Sbjct 32468 CCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 32417 Score = 120 bits (132), Expect = 3e-22 Identities = 161/219 (74%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||| |||||||| ||||| || Sbjct 32187 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 32128 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||| || ||||| ||||| ||||| ||||||| |||| Sbjct 32127 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 32068 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | ||||| | | | | ||||| ||||||| Sbjct 32067 ATGCCCTCCTTGTCC-TGAATCTTGGTCTTCA-CATTGTCGATGGTGTCAGAAGACTCCA 32010 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 |||| | || || || || || ||||| ||||| |||| Sbjct 32009 CCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 31971 >seq315 Length=240848 Score = 111 bits (122), Expect = 1e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || || |||||||| || ||||| | Sbjct 199826 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 199885 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 | || ||||| || |||| ||| | | |||||||||| ||| || ||| | || | Sbjct 199886 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 199944 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || |||||||| || ||||| ||| Sbjct 199945 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 200004 Query 41852 AAA 41854 ||| Sbjct 200005 AAA 200007 >seq274 Length=270511 Score = 105 bits (116), Expect = 6e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | ||||| || || ||| ||||||||| ||||| ||||| Sbjct 267193 ACCACCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 267134 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || || || |||| ||||||||||| || ||||| ||||| ||||| ||||||| Sbjct 267133 CGAAAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGG 267074 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||| | | ||||||||| Sbjct 267073 GGGGATACCCTCCTTGTC 267056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302156562800