Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 3e-13 >seq3 Length=6264253 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/187 (72%), Gaps = 6/187 (3%) Strand=Plus/Plus Query 254195 ACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGA 254254 ||||| || ||||| || ||| | | || || || |||||||||| ||||||| || Sbjct 3251655 ACCCG--TGCCCGCCATTTAAGATTATTATTCTCGATGAGGCGGACAGCATGACGCAGGA 3251712 Query 254255 CGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTG--TGACGCGTTTTTGC 254312 |||||||| || | || || ||||||||| | | || | | || ||||| ||| Sbjct 3251713 TGCGCAGTCTGCGTTGCGTCGCACGATGGAGCAGTATA--GTCGGATTACCCGTTTCTGC 3251770 Query 254313 CTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTT 254372 | || ||||||||||| || ||||| | |||||||| ||| ||| ||||||| Sbjct 3251771 TTAGTTTGCAACTACGTCACGCGAATCATTGAGCCGCTGGCGAGTCGATGCAGCAAGTTT 3251830 Query 254373 CGATTCA 254379 ||||||| Sbjct 3251831 CGATTCA 3251837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765987271040