Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 244 9e-60 seq19 136 4e-27 >seq1 Length=4441427 Score = 244 bits (270), Expect = 9e-60 Identities = 493/729 (68%), Gaps = 2/729 (0%) Strand=Plus/Minus Query 23249 TACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTG 23307 ||||| | ||| | ||||| || ||| ||||||| ||| || |||| ||| || | || Sbjct 2371085 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACA-TCAGCCAAGCCAGGGGCTTC 2371027 Query 23308 CATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGG 23367 | || || | ||| |||| || ||||| || |||| || |||||||| Sbjct 2371026 GTTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGG 2370967 Query 23368 TATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTT 23427 |||| || || |||||||| |||||||| | |||||||| || ||| |||||| Sbjct 2370966 AGTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACG 2370907 Query 23428 CAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCC 23487 | |||| || || || || |||| ||||| ||||| ||||| | |||||| || || Sbjct 2370906 GAGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACC 2370847 Query 23488 CGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCAT 23547 || | ||| ||||| ||||| || ||||| | ||| ||||||||| | || | ||||| Sbjct 2370846 GGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCAT 2370787 Query 23548 CGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAAC 23607 || || ||||||||||| | ||| ||| | | || || | | || | Sbjct 2370786 GGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGAT 2370727 Query 23608 GTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAG 23667 | ||| |||| | ||| || || ||| | | || || ||||| ||||| |||| Sbjct 2370726 GCGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAA 2370667 Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727 |||||||||||| || || ||||||||||| || | |||| | ||| || || | | Sbjct 2370666 AGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAG 2370607 Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787 || | | ||| ||| | || |||||| |||||| |||||| || ||||| | Sbjct 2370606 CTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTG 2370547 Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847 ||||| | | ||| || |||||||| || ||||| ||||| ||||| | ||| Sbjct 2370546 GGACATCAAGTGGTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGC 2370487 Query 23848 GACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATA 23907 || ||||||| || || || || | ||| || ||||| || ||||| || Sbjct 2370486 AACACGCATCAGCAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTA 2370427 Query 23908 TGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTAT 23967 ||| || | || || || || || || ||| ||||| || ||||| |||| || || Sbjct 2370426 TGACCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTAGTTGAAATCACGGTCGTATACAAT 2370367 Query 23968 GGCCGAATT 23976 ||||| || Sbjct 2370366 AGCCGAGTT 2370358 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || |||||||| | || |||||| | ||| Sbjct 1018408 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 1018467 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || |||| | | || ||| | | ||||||||||| | || || ||||| Sbjct 1018468 GACACAATTGATAACGTTAAGACCAAGATTCAAG-ACAAGGAAGGCATCCCCCCGGACCA 1018526 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || |||||||| || |||||||| || || || ||| || || Sbjct 1018527 GCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 1018586 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || |||||||| |||||||| || || ||| | || | || |||| Sbjct 1018587 CATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 1018636 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || || || |||||| | || || || | || |||| ||| Sbjct 1018190 TCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCG 1018249 Query 31263 AAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 | | || || || ||| | ||||||||| ||| | || || |||||||||||||| Sbjct 1018250 ACAATGTGAAGACCAAGATTCA-GGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTG 1018308 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || |||||||| || ||| |||| || || || || || ||||||||||| Sbjct 1018309 ATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAG 1018368 Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || || ||| | ||| | || |||| Sbjct 1018369 GAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTA 1018408 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| ||||| || | || || || || Sbjct 1018636 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 1018695 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | ||||| || ||| | | | ||||| ||| | || || ||||| Sbjct 1018696 GATACCATTGATAACGTCAAGACTAAGATTCAAG-ATAAGGAGGGCATTCCCCCGGACCA 1018754 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||||| || |||||||| || ||||||||||| | | | || | |||||| | Sbjct 1018755 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGA-TGGACGTACGCTCTCCGATTACA 1018813 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || ||||| || ||||| || Sbjct 1018814 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGCT 1018847 >seq19 Length=3504736 Score = 136 bits (150), Expect = 4e-27 Identities = 331/494 (67%), Gaps = 18/494 (4%) Strand=Plus/Minus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTC 57965 || ||||||||||| || ||| | || || ||||| | | || || | || ||| Sbjct 126309 ATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAG---GACAGGGAGTCGACCTTC 126253 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 || || | || | || ||||| ||||| || ||||| ||||| || ||| ||| || Sbjct 126252 GCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCT 126193 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| | ||||| || || || ||||| || || || || ||||||| | Sbjct 126192 TCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTC 126133 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC 58145 || || || ||||||||||| || || || || || ||||| ||| ||| ||| | Sbjct 126132 ATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCT---- 126077 Query 58146 AATAAACCGACGCGG--GATCGCATCTTG--GACATTATCACCGAGGCGGTCGCGATCGA 58201 | ||||| | | | | | | ||| ||||||||| |||||| |||| || || Sbjct 126076 GAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGA 126017 Query 58202 AAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGAT 58261 | ||||| | || || || || || || || |||| || |||||| | |||| Sbjct 126016 GCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGAT 125957 Query 58262 GTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGT 58319 || ||||||| |||||||| || ||| | || || | | || | ||| || Sbjct 125956 GTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGA-AGT 125898 Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379 | |||||| | | || || || || || ||| | ||||||||| | ||| ||||| Sbjct 125897 -ACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACC 125839 Query 58380 AACTTTTTCGAAAA 58393 ||||| ||||| || Sbjct 125838 AACTTCTTCGAGAA 125825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766232837600