Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq19 156 9e-33 seq3 123 5e-23 >seq19 Length=3504736 Score = 156 bits (172), Expect = 9e-33 Identities = 311/452 (69%), Gaps = 18/452 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| ||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 125828 TCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 125887 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || |||||||| | Sbjct 125888 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCCGCGACAAACTCGATG 125947 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||| | || | | || | || ||| | | Sbjct 125948 TACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGG 126007 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC----ACCTG-TGCCAGAG 251797 || |||| || || | || ||||| | | || || |||| ||||| | | | | Sbjct 126008 AACTCCTGCTCAATGCCGACGGCCTCGACGATAA-TGTCTTCAACAACCTGTTTGCTGGG 126066 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCG 251856 | | ||||| ||| | ||| |||| | || || || | | ||||||||||||| Sbjct 126067 GC-GGTTGTT---CAGGTGGGAGAACAGCAGGCAAGCGAAGTCGGT-GTGCAGACCCTCG 126121 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||||| ||||||||| | || |||||||| | ||||| ||| ||||| Sbjct 126122 TCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGC 126181 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACA 251976 |||||||| | ||||| || ||||| | | |||||| || | | ||||| Sbjct 126182 CAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACG 126241 Query 251977 AGGCGCTCAGCAAA---CGACT---TGTCCTG 252002 || |||| ||| || ||||| ||||||| Sbjct 126242 AGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 126273 >seq3 Length=6264253 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || || |||| ||||||||||| ||| Sbjct 576601 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAAC 576660 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||| ||||| | |||||||||| | || || ||||| |||| ||||| || | Sbjct 576661 CAGACCAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC 576720 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 576721 GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 576780 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 |||||| | ||| || || || ||||||||| Sbjct 576781 GATGAGGTCAAGACCGTCTACGTCGAGCACGAC 576813 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/133 (76%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCC--ATTCTACTGCGTG 279759 || || || ||||||||||||||||||||||| || | || ||| ||| | | | Sbjct 576961 TCCCTCTCCGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTCTTCGAGTCC--C 577018 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 ||||| |||| ||||| |||||||| ||||||||| ||||| || ||||| |||||| Sbjct 577019 CCGATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCCTGGT 577078 Query 279820 TAGTGTCCTACCT 279832 | | | |||||| Sbjct 577079 TGGAGAACTACCT 577091 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205 ||||| || || ||| || |||| ||||| || ||||| ||||| ||||| |||||| Sbjct 577402 CAGGTCTCCCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCTACC 577461 Query 280206 CTAATCAAAGTCCTGACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCAT 280262 || |||| |||||||| || ||| | || |||||| | ||| | |||| Sbjct 577462 CTGGTCAACGTCCTGACCGGTGAGTTGATCCCCACCACTGGTGA---CGTCTACCAGCAC 577518 Query 280263 CCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTG 280322 ||||| || || || ||| || |||||||||||| ||||| || |||||||| Sbjct 577519 GAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCTCACATTGATAACCACCTC 577578 Query 280323 GACATGACTCCTAACCAATACATTCAGTGGCG 280354 || ||||| | | ||||| |||||||| Sbjct 577579 GATTCCACTCCCTCCGAGTACATCCAGTGGCG 577610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836404925230