Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 176 8e-39 seq19 138 2e-27 seq11 120 6e-22 seq3 116 7e-21 seq15 91.5 3e-13 >seq1 Length=4441427 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| ||||| |||||||| || ||||| Sbjct 1018634 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAC 1018575 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || |||||||| || ||||| || | | || ||||| || || Sbjct 1018574 AAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGG 1018515 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||||||||| | ||| ||| || || ||||| | ||||| ||| Sbjct 1018514 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACT 1018455 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || ||||||||||| ||||||||||| |||||||| Sbjct 1018454 TCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 1018408 Score = 161 bits (178), Expect = 2e-34 Identities = 176/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| ||||| || || || || | |||| ||| || ||| ||| || |||||||| || Sbjct 1018869 TTAGTTTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTA 1018810 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 ||||||||| || | |||||||| |||||||| || ||||| ||||| | || ||||| Sbjct 1018809 ATCGGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTC 1018750 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || |||||||| ||||| ||||||||||| | ||||||| || ||||| || | Sbjct 1018749 CGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCT 1018690 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||| || || || || || || || ||||| ||||| |||||||| Sbjct 1018689 CTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 1018636 Score = 145 bits (160), Expect = 1e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || ||||| ||||| || || || Sbjct 1018406 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1018347 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 1018346 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 1018287 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||| || ||||||||||| | || || || Sbjct 1018286 ATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACC 1018227 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | ||||||||| ||||| || ||||||||||||| || Sbjct 1018226 TCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGACTA 1018187 >seq19 Length=3504736 Score = 138 bits (152), Expect = 2e-27 Identities = 318/473 (67%), Gaps = 12/473 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || |||||| |||||||||||||| ||| ||| | Sbjct 125791 CATGACACCAGCCTTCTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGC 125850 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || || |||||||||||| |||||||| |||| | | ||| || || Sbjct 125851 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 125910 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | |||||| || || |||||||||||||| | |||||| | ||||| Sbjct 125911 GAGGGCCACCAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTT 125970 Query 10115 CATGCCAATCA-TGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||||| | || || | ||| | ||||| | ||| |||| || || |||| | Sbjct 125971 CATGCCCAGCAGAGCAAC-GGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGG 126029 Query 10174 CTTCCTCGACGATGCTCTTTACCA-----CGTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 | || ||| ||| |||| | || | ||| | | |||||| || | || Sbjct 126030 CCTCGACGATAATG-TCTTCAACAACCTGTTTGCTGGGGC-GGTTGTTC---AGGTGGGA 126084 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 |||| || | || | ||| || |||||||| || ||||| ||||||||| Sbjct 126085 GAACAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGA 126144 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || ||||| |||||||| || || || |||||||| |||| ||| || || Sbjct 126145 GAAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCC 126204 Query 10349 GGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 |||||| | | |||||| ||| | | || ||||| |||| ||||||| Sbjct 126205 GGAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGG 126257 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || ||||||||| | | || ||||| |||| | ||| ||||||| Sbjct 126535 AGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGGAGATGAAG 126594 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||| || |||||||| | ||||||| || ||||| | || | || Sbjct 126595 TAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAAATCCTTGGACAGATCGATT 126654 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||||| || ||||||||||||||||||| Sbjct 126655 TCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTG 126698 >seq11 Length=4837238 Score = 120 bits (132), Expect = 6e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 2951679 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 2951620 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || || || || || || || |||||||| || ||||| | ||||||| ||| Sbjct 2951619 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 2951560 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || |||||||||||||||||||| Sbjct 2951559 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 2951501 >seq3 Length=6264253 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 || || | |||||| || ||||| || ||| || || | | |||||| ||||| Sbjct 576821 GCATCCAAGTCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCA 576762 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 ||||| | || || ||||| | ||||| |||| || | |||||||| |||| Sbjct 576761 AGCTGCTCGTTGTTGATGGCACGCATGAGGGTGGTCTTACCGGTACCGTTGGGGCCGAGC 576702 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949 || |||||| | | || ||||||| | ||||| || |||||| || |||||| || Sbjct 576701 AGACCGTAACGCTGACCACGCTTGAGGCGGAGGCTGGTCTGGTTCAGCAGAATCTTGGCA 576642 Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 || ||||| |||||||| ||| | |||||| |||||||||||||| Sbjct 576641 CCGTAGGCCAGGGAGAAAGTGCAGTTGCACAGATCCTCACCCTCCTC 576595 >seq15 Length=3991555 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 225432 CCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCG 225491 ||| ||| ||| | || |||||||| |||||||| || || || | | | || | Sbjct 1408827 CCGTGCAGACTTCATCCAGGAAGCCCGAGTCGTGAGAGACGATCAAACTGGTGATGTCGG 1408768 Query 225492 TCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAG 225551 | | ||| |||| | |||||| |||||| || |||| |||||| || | Sbjct 1408767 TGTGCTTCTTCAGGTACTCCTGGAGCCACTTGACGTTGGCCACATCCAAGTGGTTAGTCG 1408708 Query 225552 GTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCA 225611 |||||||||| || |||| ||| || | || ||||| |||| |||| ||||||| Sbjct 1408707 GTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAGCATGGCACGCGCCAGAGCGAGCTTCA 1408648 Query 225612 TTTTCCAGCCCCCGGACAGGGAGCC 225636 | ||||| || |||||||||||||| Sbjct 1408647 TCTTCCATCCTCCGGACAGGGAGCC 1408623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622054391600