Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq19 143 3e-29 seq11 93.3 4e-14 seq3 91.5 1e-13 seq1 89.7 5e-13 >seq19 Length=3504736 Score = 143 bits (158), Expect = 3e-29 Identities = 348/525 (66%), Gaps = 29/525 (6%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| ||||| | ||||| || ||||||||| || |||| | Sbjct 126318 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAG---GACAGGGAG 126262 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || |||| | || || ||||| || ||||| | || || |||||| Sbjct 126261 TCGACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGC 126202 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 ||| || ||||||| | | || | | || | ||||| || || || ||| | Sbjct 126201 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCC 126142 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 |||||| | || || || ||||| || |||||||| ||||| || ||||| || | Sbjct 126141 AACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCC 126082 Query 52557 TAC---AAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG 52613 || || | ||| | | || | | | | |||| ||| | Sbjct 126081 CACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTC------------ 126034 Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 ||||| || | || || ||||||| | || | ||| ||||| || | ||||||||| Sbjct 126033 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGC 125974 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||| | || ||||| |||||||||||||||| ||||| || ||| ||||| Sbjct 125973 ATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCC 125914 Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTC 52792 ||||| || | | ||||||| |||||| ||| || || || || ||| | || || Sbjct 125913 CTCGG-CAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTC 125855 Query 52793 GCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| | ||| ||||||||||| ||||||||||| || || || || Sbjct 125854 GCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGAGACTA 125810 >seq11 Length=4837238 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 2951681 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 2951622 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||| || ||||| || ||||| || ||||| || | || || || | ||| Sbjct 2951621 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 2951563 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| || || || || || Sbjct 2951562 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGAC 2951504 Query 138603 AAAA 138606 ||| Sbjct 2951503 GAAA 2951500 >seq3 Length=6264253 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 57300 GGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC 57359 || || || |||||| | ||| |||||||| ||| || | | | |||||| ||||| Sbjct 851819 GGTCTTGAAGTTGCCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGT 851878 Query 57360 GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419 ||||| |||||| ||||| ||| || || |||||||||||| || |||| ||||| Sbjct 851879 CTTGCCGAAGGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAA 851938 Query 57420 CTCGTGAACGTGAAATCC 57437 || ||| ||||| || || Sbjct 851939 CTGGTGGACGTGGAAGCC 851956 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || || || | | | |||||||| || ||||||||||| Sbjct 4513869 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 4513928 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||||||| || ||||| | |||| |||||||| |||||||| || Sbjct 4513929 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 4513988 Query 138508 ATACCTTCTTTGTC 138521 ||||| || ||||| Sbjct 4513989 ATACCCTCCTTGTC 4514002 >seq1 Length=4441427 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | || | | | || |||||||||||||||||||| | Sbjct 1018406 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1018347 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || || || | |||| |||||||| |||||||| || Sbjct 1018346 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 1018287 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || || || |||| || | |||||| | ||||||| Sbjct 1018286 ATGCCCTCCTTGTC-CTGAATCTTGGTCTTCACATTG-TCGATGGTGTCAGAAGACTCCA 1018229 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| | || | || || || ||||| || || || Sbjct 1018228 CCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 1018192 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||| || ||||| ||||| | || ||||| | Sbjct 1018601 GATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCG 1018542 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | |||||| |||||||| || || ||||| ||||| ||| | || || |||| Sbjct 1018541 AAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 1018483 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||||| || || || || | || | ||| || || || ||||| || Sbjct 1018482 GTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTT 1018423 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1018422 GACGAAGATCTGCAT 1018408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262213901600