Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq19 125 9e-24 seq1 98.7 1e-15 seq3 82.4 9e-11 >seq19 Length=3504736 Score = 125 bits (138), Expect = 9e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| |||||||||||||| |||||||| || || |||||| ||||| ||||||||||| Sbjct 126109 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 126168 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | | || ||||| ||||||||||| ||||| || Sbjct 126169 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 126228 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 ||||| |||| ||||||| || |||| || | ||| | | |||||| || | Sbjct 126229 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 126287 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 |||| | ||||| || | || || ||||| Sbjct 126288 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 126318 >seq1 Length=4441427 Score = 98.7 bits (108), Expect = 1e-15 Identities = 455/717 (63%), Gaps = 14/717 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||| ||||| |||||||| ||| |||||||| || || | Sbjct 2371890 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 2371831 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || ||||||||||| || | || | ||||||||||| ||| | || || Sbjct 2371830 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 2371771 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 ||||| || ||||||| || | | | | |||||||| || |||| ||| Sbjct 2371770 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 2371711 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 ||||| ||||| | || |||||||| | ||||| || | || ||| || | Sbjct 2371710 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 2371651 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGC 116201 ||||| || | | |||||||| || ||||| || || | |||| || Sbjct 2371650 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 2371591 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 || ||||||| | || || || | || ||| | || |||| || ||||| | Sbjct 2371590 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 2371532 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 116318 |||||| || |||| || || || | | || ||||| || |||| ||||| Sbjct 2371531 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 2371475 Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378 || | || | ||||| | | | || | || | | |||| || || || Sbjct 2371474 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 2371415 Query 116379 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 116435 ||||| | | ||| | | ||||| | ||| ||| | |||||||||| | Sbjct 2371414 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 2371358 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 || || || || || |||| ||||||| | || ||||||| || || || || || Sbjct 2371357 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 2371298 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 | || || || ||||| || | |||||| || || ||| |||| || ||||| Sbjct 2371297 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 2371238 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 |||||| ||||| | || | || ||||| || || | || |||||||| | ||| Sbjct 2371237 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCA 2371181 >seq3 Length=6264253 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGG--TTGATTTTCACGGGCAA 12930 ||||||| || |||||||| || ||||| | || || || | ||||| | || | Sbjct 1554845 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 1554901 Query 12931 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988 || | || | ||| || |||| | ||||||||| ||||||||||| ||||| | Sbjct 1554902 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 1554960 Query 12989 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046 | | | | ||| | || |||||| ||| ||||||||| || |||| ||| || Sbjct 1554961 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 1555018 Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 | ||||| || || || || |||| |||| ||||||||| ||||| ||||||| Sbjct 1555019 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 1555077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506969934800