Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq19 172 5e-38 seq11 118 1e-21 seq1 107 2e-18 seq3 84.2 2e-11 >seq19 Length=3504736 Score = 172 bits (190), Expect = 5e-38 Identities = 204/276 (74%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| ||||| ||| || || | || ||||| | ||||||||| ||| || || Sbjct 126420 GTAGGTATCGATCAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 126479 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||||| ||||| || ||||| ||||| || || ||| |||||||| || || Sbjct 126480 TCCGTAGAAGCAACGAGCCTCAGGAACCTGGACCTCGCCGCTGAAGCGCTCGACAAGGTT 126539 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| ||||| ||| ||| ||||| || || || ||||| |||||| | ||| Sbjct 126540 CTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGGAGATGAAGTAGCG 126599 Query 133347 CTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| |||||||| ||| | ||||||| || ||||||||||| || | ||||| Sbjct 126600 CTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAAATCCTTGGACAGATCGATTTCCTC 126659 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| || || |||||||| || |||||||| Sbjct 126660 GGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 126695 Score = 163 bits (180), Expect = 3e-35 Identities = 348/515 (68%), Gaps = 10/515 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || || || ||| ||||| || || || || || ||| | Sbjct 125791 CATGACACCAGCCTTCTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGC 125850 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 || || || | ||| || || |||||||||| | |||||||| ||| | |||| Sbjct 125851 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 125910 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || || | || ||||| | ||| || || ||||||||||| || |||| | | | Sbjct 125911 GA---GGGCCACCAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGA 125967 Query 132768 ATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGAC 132827 || | ||||||||| || ||||| || || || || || ||||| ||| |||| Sbjct 125968 GTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGAC 126027 Query 132828 CGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA 132887 || ||| || || || ||| | ||| || || | || || ||| Sbjct 126028 GGCCTCGACGATAATGTCTTCAACAACCTGTTTGCTGGGGCGGTTGTTCAGGTGGGAGAA 126087 Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947 || || |||||| |||||| |||| |||||||| | || ||||| |||||| ||| Sbjct 126088 CAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAA 126147 Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007 || | || |||||||| || || || |||||||| || |||| ||||| ||| || Sbjct 126148 GGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGA 126207 Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCT-TCT 133065 ||||||| ||||| ||||| |||||||| || || |||| |||| || | || || Sbjct 126208 GAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCT 126267 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | ||| |||||| | ||||| |||||||| Sbjct 126268 GTCCTG--GATCCACTTAATGGCCCAATCGGCCTT 126300 >seq11 Length=4837238 Score = 118 bits (130), Expect = 1e-21 Identities = 138/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||| ||| ||||||||||| | | ||||| | | Sbjct 2951501 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2951560 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| || ||| | || || ||||| | Sbjct 2951561 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTC 2951618 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||||| || || | |||||||| | ||||||||||||||| | Sbjct 2951619 TTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 2951678 Query 38431 AGG 38433 ||| Sbjct 2951679 AGG 2951681 >seq1 Length=4441427 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| |||| |||||| ||| ||| | | | | |||| | || Sbjct 1017901 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACG--TCAA 1017958 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| || || ||||| || || ||||||| ||||| || || | ||| || Sbjct 1017959 GACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGG 1018018 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 || |||||||| || | ||||| || | |||||||||||||| ||||| | || || Sbjct 1018019 AAAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCT 1018078 Query 38444 GCATTTGGTGCTGCG 38458 ||| | || || || Sbjct 1018079 CCATCTTGTCCTCCG 1018093 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || || || | || || ||| | | Sbjct 1018636 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 1018695 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | |||| || || | || || ||||| |||||| | |||| Sbjct 1018696 GATACCATTGATAACG--TCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACC 1018753 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || ||| |||| || | || || ||| ||| |||| Sbjct 1018754 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACA 1018813 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||| || ||||| ||||||| ||| | | ||||| Sbjct 1018814 ACATCCAGAAGGAGAGC-ACTCTGCACCTGGTGCTCCGTCTCCGTGGCGG 1018862 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || || || || || ||||||||| | || || ||| | | |||| | Sbjct 1018187 TAGTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCA 1018246 Query 38311 TGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 | | || | | |||| || || | ||||| ||||| |||||| | ||||| ||||| Sbjct 1018247 TCGACAATG--TGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCG 1018304 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 || || | ||| || || |||||||| || | || ||||| ||||||||||| || Sbjct 1018305 TCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCA 1018364 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| | || || || | || || ||| || | || || Sbjct 1018365 AAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 1018406 >seq3 Length=6264253 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/138 (76%), Gaps = 6/138 (4%) Strand=Plus/Plus Query 107663 CTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATC-TCGGCGTCGGGCGCGCCGTGG-TCG 107720 ||||| |||||| ||||| |||||||| | | || ||| | ||||| || |||||| || Sbjct 851822 CTTGAAGTTGCCAAGGTCACCGACGTGAC-GCTCGTCGTCCTCGGGAGCACCGTGGGTCT 851880 Query 107721 CGCTTCGTCGGG-TTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAA 107779 || || ||| ||||| || ||| || || |||||||||||| | ||| ||||| Sbjct 851881 TGC--CGAAGGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAA 851938 Query 107780 CTCGTGCACGTGGAAGCC 107797 || ||| ||||||||||| Sbjct 851939 CTGGTGGACGTGGAAGCC 851956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172612435200