Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 383 2e-101 seq23 136 5e-27 seq14 89.7 7e-13 seq1 86.0 8e-12 >seq3 Length=6264253 Score = 383 bits (424), Expect = 2e-101 Identities = 767/1134 (68%), Gaps = 11/1134 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| || || ||||| | || ||||| || || |||||||||||||| Sbjct 2369249 TCACCAGACAGGATAGCAGCCTGGACGGCAGCACCGTAGGCAACGGCCTCATCGGGGTTG 2369190 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || || || ||| || | || | | | || || || ||| Sbjct 2369189 ATGGACTTGTTGGCGTCCTT---GTTGAAGAAGTCACTGACGAGACGCTGGATCTTGGGG 2369133 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||||| ||||| || | || || || |||||||| | | Sbjct 2369132 ATACGGGTGGAACCACCGACCAGGACGATCTCGTGGACGGAGGACTTGTCGATCTTGGCG 2369073 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| |||||| | |||| || || ||| Sbjct 2369072 TCACGGAGGACACGCTCGACGGGCTCCATGGTGGAACGGAAGAGGTCCTGGCAGAGCTCC 2369013 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| ||||| || ||||| || | || ||| | | || || || Sbjct 2369012 TCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCGATC 2368953 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||||| || || || | ||||| | || ||||| || ||||| || || || || Sbjct 2368952 TCAATGGAGGTCTGGGCAGCGGAAGAGAGGGTACGCTTGGCACGCTCGCAAGCGGTGCGG 2368893 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | || ||||| || || || || ||||| Sbjct 2368892 AGACGACGGAGAGCACGAGCGTTGGAGGTGAGGTCCTTCTTGTGCTTGCGCTTGAACTCG 2368833 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||| | ||||| || |||||||||||||| || || || Sbjct 2368832 TTGACGAAGTGGTTGACGAGGCGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCA 2368773 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | | | || ||||| || ||| Sbjct 2368772 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAGGAGGGAGACATCGAAGGTA 2368713 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 |||||||| || || || ||||| ||||| || | || ||||| || |||||| Sbjct 2368712 CCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACCCTCGGCCTTCTTGTCCAGACCG 2368653 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || || || || || || || || || || || ||||| ||| ||||||||| ||||| Sbjct 2368652 TAGGCAATGGCAGCAGCGGTGGGCTCGTTGATGATACGGAGAACGTTCAGGCCGGCAATG 2368593 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || || || || || || ||||| |||||||| ||||| || | | Sbjct 2368592 AGACCAGCATCCTTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACAGTGATG 2368533 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| |||| | |||||| || | || ||| | || ||| ||||| || Sbjct 2368532 ACAGCGTTGTTGACGGTGCCACCGAGGTAGGCCTCAGCGGTCTCACGCATCTTGGTGAGG 2368473 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || | ||| || | | ||||| || || || || || || ||||| || Sbjct 2368472 ATCATGGAGGAGACCTCCTCGGGGGTGAACTGCTTGGTCTCGCCCTTGAACTCAACCTCG 2368413 Query 7850 ATCATGGGTTTATC-CGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 | ||||| || | | | | | || |||||| | | ||| | ||||| || Sbjct 2368412 ACGATGGGCTTGCCACCCTTCTC----GACAACCTTGAAGGGCCAGTGCTTCATGTCAGA 2368357 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| ||| | ||| | ||||| |||||||| ||||| || || ||||| Sbjct 2368356 CTGGACCTCAGCGTCGGCAAAACGACGACCGATCAGACGCTTAGCATCGAAGACGGTGTT 2368297 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 | ||||||||||| |||||||| || || || ||||| ||||| || | || Sbjct 2368296 GTGAGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---GGTGTC 2368240 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || || ||| | || ||||| || || || || |||||||| || || ||||| | Sbjct 2368239 GGTGAAAGCCACGAAAGAGGGGGTAGTGCGGTTACCCTGGTCGTTGGCGATGATTTCAAT 2368180 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 |||||| | | |||| || || || || || || ||||| ||||| ||||| Sbjct 2368179 GCGGTCATCACGGAAGACACCCACACAGGAGTAGGTGGTTCCCAAATCGATACC 2368126 >seq23 Length=3271372 Score = 136 bits (150), Expect = 5e-27 Identities = 357/542 (66%), Gaps = 7/542 (1%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| || ||||| || |||||||| ||||| | || ||| || |||| ||| | || || Sbjct 1142537 CAGATCTTCAAAGCGAGCACGGGTGATGGAGGAATTGAAGTCCTCGCCATCGAACAAAGA 1142478 Query 7303 ATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 || ||||| | || || || | ||| | || || || ||||| || ||||| || Sbjct 1142477 GTCGATTTCCACAGTGGTCTGGGTAGCGTTG--GACAAAGTACGCTTAGCACGCTCGCAA 1142420 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || |||| | ||||| ||||| | || || || || | || || | || || Sbjct 1142419 GCGGTTCTGAGGCGACGGAGGGCTCTCGCGTCTCCAGAGAGGTCCTTGCCAGTCTTGCGC 1142360 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| | |||||| ||||| | | ||| || |||| ||||| | ||| Sbjct 1142359 TGGAACTCCTTCTTGAAGTGGTCCAGGAGGTTGGTATCAAAGTCTTGTCCACCAAGGTGG 1142300 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 ||||| || || || || || || |||| ||| |||| ||||| | | || ||| Sbjct 1142299 GTATCTCCGGCAGTAGCCTTAACAGTGAAGACACCACCTTGGATGTTAAGGAGAGACACA 1142240 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTC 7597 || || ||||||||||| || || | || || ||||| || | || ||| Sbjct 1142239 TCGAAAGTACCACCACCAAGATCGTAGATAAGAACGTTACGCTCCTTATCAGACTTGCCG 1142180 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 | || || || || || || || || || || || || || ||||| || ||| Sbjct 1142179 GAGCCAAGGCCATAAGCAATTGCTGCTGCAGTGGGCTCGTTGATGATACGGAGCACGTTG 1142120 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 || |||||||| | | ||||| || || || || || || ||||| || || || Sbjct 1142119 AGACCAGCAATGGCACCAGCATCCTTAGTAGCCTGGCGCTGGTTGTCGTTGAAATAAGCG 1142060 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 || || || | ||| || | | ||| ||||| ||||| | | |||||||| |||||| Sbjct 1142059 GGCACGGTGATGACTGCCTTCTCGACCTTCTTTCCGAGTTTGGTTTCCGCGACCTCTTTC 1142000 Query 7778 AT 7779 || Sbjct 1141999 AT 1141998 >seq14 Length=4132392 Score = 89.7 bits (98), Expect = 7e-13 Identities = 125/175 (71%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 7971 TGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCG 8030 ||||||| ||| ||||||||| || ||||| |||| || ||||| | || | | Sbjct 3057040 TGGGGTTGGCGGCGTATTGGTTCTTAGCGGCGTCACCGACCAGGCGTTCCTCAT---CGG 3056984 Query 8031 TAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGC 8090 | || |||||||| || ||||| | || || |||||||||||| | | |||||| || Sbjct 3056983 TGAAAGCGACGTATGAAGGGGTGATACGGTTTCCTTGGTCGTTCACGAGAATTTCGACCT 3056924 Query 8091 GGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | || ||| || ||||| || || || || ||||| | ||||||||| || Sbjct 3056923 TTCCATTCTGCATAACACCGACACAGGAGTAGGTGGTTCCCAGATCAATACCAAT 3056869 >seq1 Length=4441427 Score = 86.0 bits (94), Expect = 8e-12 Identities = 342/533 (64%), Gaps = 9/533 (2%) Strand=Plus/Minus Query 105466 TATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGA 105525 || |||||||| || | || ||||| | |||||| || || | | || || | Sbjct 2371085 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 2371026 Query 105526 TCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGA 105585 | || || |||| | ||| | || | | ||||| || |||||||||| ||| ||| Sbjct 2371025 TTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGA 2370966 Query 105586 ATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGA 105645 |||||| ||| | || || || || || |||| || | ||| || ||| ||| Sbjct 2370965 GTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGG 2370906 Query 105646 ATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCT 105705 | || || || |||| | ||| | |||||| || || | |||| |||| || || Sbjct 2370905 AGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCG 2370846 Query 105706 TTACGAC----GCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACAT 105761 ||| ||| | || | | || ||||| || || ||| | || || | ||| Sbjct 2370845 GGACGCTTGTTGCCACCCTGG-TCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCAT 2370787 Query 105762 TGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTAC 105821 |||| || ||| | ||| || || || || |||| ||| | ||| | | || | Sbjct 2370786 GGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGAT 2370727 Query 105822 ATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATAC--GCGCACACTCTTTT 105879 ||| |||| | |||||||| || || ||| ||| ||||| | |||| Sbjct 2370726 GCGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCA-AGTCTTCA 2370668 Query 105880 ACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGAC 105939 | || ||||| |||||||| || || || ||||| | | | ||||| || || | Sbjct 2370667 AA-GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCA 2370609 Query 105940 ATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAA 105992 | || || ||| |||||||| ||||||||||| || | || ||| |||| Sbjct 2370608 AGCTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA 2370556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132561825200