Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq19 154 2e-32 seq3 82.4 9e-11 >seq19 Length=3504736 Score = 154 bits (170), Expect = 2e-32 Identities = 165/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 102165 |||| || || ||| ||||| || |||||||| || |||||| | | ||| ||| Sbjct 126320 CAGTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGT 126261 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 || |||| ||| |||| ||| | || || || |||||||||||||||||||| | Sbjct 126260 CGA---CCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCG 126204 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 | |||||| | || | |||||||||||||| ||||||||||| |||||| ||||| Sbjct 126203 GCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCT 126144 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||||| ||||||||||||||||| || ||| Sbjct 126143 CCAACGAGCTCATCTCTCGTGACGAGGGTCTGCAC 126109 >seq3 Length=6264253 Score = 82.4 bits (90), Expect = 9e-11 Identities = 218/324 (67%), Gaps = 17/324 (5%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTG 16032 ||||||||||| || || | | |||||| | || || |||||||| || ||| | Sbjct 1554761 AAACCATCCATTTCGGTAAGGATCTGGTTCAGGGTGCTCTCGCGTTCATCGTTACCGCCG 1554820 Query 16033 GCATACCACCAGCACTGCG---TTGCTTTCCC-ACGGCATCAATCTCATCAATGAAGACG 16088 | || | | || || ||| ||| || | |||||||| ||||| ||||||| Sbjct 1554821 CCGTAGTTCGA---CTTCGCTCTTGATTTACCGATAGCATCAATTTCATCGATGAAGATA 1554877 Query 16089 ATGCATGG--TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCA 16146 ||||| || | ||||| |||| || | || ||||| || || || | || | Sbjct 1554878 ATGCAGGGCGTCGATTTCCGCG--CGTTGGCGAACAGATCACGAACTCGGGAAGGACCGA 1554935 Query 16147 CACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAGA 16204 |||| ||||||||||| ||||| | | | | | ||| | || |||||| || || Sbjct 1554936 CACCGACAAACATCTCGACAAACTCCGAACCACTG-ACACT-GAAGAAGGGCACGCCGGA 1554993 Query 16205 TTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAG 16264 |||||| || |||| ||| || | |||||||| ||||| || ||||| || | Sbjct 1554994 TTCACCAGCCGTGGCCTTGGCAAGTAACGTCTTACCGGTACCCGGAGGACCCGAAAGAAT 1555053 Query 16265 GGCACCTCGTGGAATCTTGGCGCC 16288 |||||| || || || ||||| || Sbjct 1555054 GGCACCACGGGGGATTTTGGCACC 1555077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742167221600