Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq19 100 3e-16 seq3 96.9 4e-15 seq4 86.0 7e-12 seq1 84.2 3e-11 seq15 82.4 9e-11 >seq19 Length=3504736 Score = 100 bits (110), Expect = 3e-16 Identities = 150/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||||||||| || |||| || ||||||||||| || Sbjct 126110 TGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCA 126169 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| | || || || |||||||| ||||| || Sbjct 126170 CGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCA 126229 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683 |||||||| | ||||||| ||| |||||||| | |||| || |||||| | || Sbjct 126230 GCGAAAGCAACGAGACGCTGAGC-GAAGGTCGACTCCCTGTCCTGGATCCACTTAATGGC 126288 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||| | |||||| | ||||||||||| Sbjct 126289 CCAATCGGCCTTCTTGGCAATGCAGGGGAC 126318 >seq3 Length=6264253 Score = 96.9 bits (106), Expect = 4e-15 Identities = 222/327 (68%), Gaps = 8/327 (2%) Strand=Plus/Plus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGT-TGGTTGGCACGTGCCTG 11732 ||||||| ||| ||||| ||||||||||| | || || || | | | | || || | Sbjct 1554845 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTC-CGCGCGTT 1554903 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || ||||| || || | || ||||| || |||||||| || || | | Sbjct 1554904 GGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTCCGA 1554963 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || |||||||| |||||| || || |||||||| |||| || || | | Sbjct 1554964 ACCACTGACACTGAA-GAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGTAACG 1555022 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909 ||||||| ||||| || | ||| | |||| ||| ||||||||||| |||||||| || Sbjct 1555023 TCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACCCAGCT 1555082 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | |||| || || ||||| |||||| || | ||| | |||| |||| || Sbjct 1555083 TC--TGGAAGCGTTCCGGGTTCTTCAGGAAGCTGACGAATTCCATGATTTCCACCTTAGC 1555140 Query 11970 GGAGTCGATACCCTCAACATCGGTGAA 11996 || ||||| | || |||| ||| Sbjct 1555141 TTCATCCATACCAGCCACGTCGGAGAA 1555167 >seq4 Length=5028727 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 3575537 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 3575596 Query 136776 TGGGAACAGCTTTTAGATATATTTT 136800 ||||| || ||||| | | | |||| Sbjct 3575597 TGGGACCATCTTTTTGCTTTTTTTT 3575621 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 4428709 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 4428650 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 4428649 TGGGACCATCTTTT 4428636 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 4429459 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 4429518 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 4429519 TGGGACCATCTTTT 4429532 >seq1 Length=4441427 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 4252414 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 4252355 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 4252354 TGGGACCATCTTTT 4252341 >seq15 Length=3991555 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 655230 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 655289 Query 136776 TGGGAACA--GCTTTTAGATATATTTTTT 136802 ||||| || ||||| | | | |||||| Sbjct 655290 TGGGACCATCTCTTTTTGCTTTCTTTTTT 655318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975779134000