Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 168 8e-37 seq19 98.7 1e-15 seq3 86.0 7e-12 >seq1 Length=4441427 Score = 168 bits (186), Expect = 8e-37 Identities = 586/913 (64%), Gaps = 66/913 (7%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 |||||||| | || || | ||||| ||||| ||||||| | | ||||||| | Sbjct 2371368 GGAAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATG 2371309 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | |||||| || || || || | ||||| ||||| ||||| ||| Sbjct 2371308 ATCTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTG 2371249 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||| |||||| |||| | || ||||| ||||| | || ||||| Sbjct 2371248 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATA 2371189 Query 106637 GCCTTCCACA-CATCGGCG----GCTGGTACAATGGCGTTGGCC--------CGTCCCTC 106683 || | ||| | | || | | | |||||| | ||| |||| ||| ||| Sbjct 2371188 GCGTACCAGAGCTTCTGAGCCTTGATGGTACGACGGCCACGGCCTTCCTTCTCGTACCTA 2371129 Query 106684 C----------GCCT--------------------------CGTACTTTGTGTAGAGGGC 106707 | || | | ||||| ||||||||| Sbjct 2371128 CAATACTATTAGCATGAGTTGAGAATACACGAACCAACAAACTTACTTCTCGTAGAGGGC 2371069 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGA 106767 || ||||| ||||| | || | | || || || | || || ||||| |||| Sbjct 2371068 GTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGT 2371009 Query 106768 CCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAA 106827 ||| | || | ||||||| ||||||||||| || || ||| ||||||||| | || Sbjct 2371008 CCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAGAA 2370949 Query 106828 GAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 ||||| | | | || |||| || | ||| ||||| || | || |||||||| | Sbjct 2370948 CAGATCGCGGGCTCTGA-CCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGA 2370890 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------C 106940 || ||||| |||||| |||||||| |||| || | || || ||||| | Sbjct 2370889 AGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACC---GGGACGCTTGTTGC 2370833 Query 106941 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 107000 || | || | || || | || ||| ||| || || |||||||| |||| || ||| | Sbjct 2370832 CACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGT 2370773 Query 107001 CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCA 107060 || ||| || || || | ||| |||| | | | | || | || || Sbjct 2370772 TGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCA 2370713 Query 107061 TCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 |||||||| || || ||| ||||| | ||||| | | | | | ||| | ||||| Sbjct 2370712 GACCAATACCACCGGCGGTCTTGGAGATCATAGCGCA-AGT-CTTCAAAGTGTCGTAGAT 2370655 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 ||||| || ||||||||| || ||| ||||||||| || | ||| || || Sbjct 2370654 ACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGG 2370595 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGT 107237 |||||||| ||||| || || || | |||||| |||| ||| | ||||||||| || Sbjct 2370594 AGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTCTGGGACATCAAGT 2370536 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||| ||||| | | | || ||||| |||||||| || | ||| |||||||| | Sbjct 2370535 GGTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCA 2370476 Query 107298 ACATGTATTGGGG 107310 || || ||||| Sbjct 2370475 GCAGGTGCTGGGG 2370463 >seq19 Length=3504736 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| || || || || || || || |||||| || || ||||||||||| Sbjct 126109 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 126168 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | ||| || |||||||||||||||||||| || Sbjct 126169 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 126228 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| || |||| ||||||| ||| | ||| | | ||| || || | Sbjct 126229 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 126287 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 |||| | |||||||| |||| || || || Sbjct 126288 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 126318 >seq3 Length=6264253 Score = 86.0 bits (94), Expect = 7e-12 Identities = 159/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGG--TTGATTTTCGCGGGCGATTTCAAAGA 9429 |||||||| ||||| ||||||| ||| || || | ||||| |||| || | | || | Sbjct 1554854 GCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCG--CGTTGGCGAACA 1554911 Query 9430 GATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGA 9487 |||| ||||| | | || ||||| ||||||||||| ||||| | | | | | Sbjct 1554912 GATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTCCGAACCACTG- 1554970 Query 9488 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9547 ||| | || |||||| || |||||||| || |||| ||| || | |||||||| Sbjct 1554971 ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGTAACGTCTTACC 1555029 Query 9548 CGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||| || ||||| || | |||||| || || || ||||| || Sbjct 1555030 GGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 1555077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980578757200