Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 159 8e-34 seq11 95.1 3e-14 seq3 89.7 1e-12 >seq1 Length=4441427 Score = 159 bits (176), Expect = 8e-34 Identities = 163/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 ||||||||||||||||| ||||| || || ||||| |||| |||| || | ||||| || Sbjct 1018616 ACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAG-GTACGGCCATCCTC 1018558 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | ||||||||| |||||||| | || || ||||| || || |||||||| |||||||| Sbjct 1018557 CAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTG 1018498 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| ||||| ||||| ||| ||| ||||| | || | |||||| Sbjct 1018497 AATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTT 1018438 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | ||| || ||||| | ||||| Sbjct 1018437 TCCCGTGAGAGTCTTGACGAAGATCTGCAT 1018408 >seq11 Length=4837238 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| || ||||||||||| ||||||||| Sbjct 2951679 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 2951620 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || || || || || || || || ||||| || || || ||||||||| || Sbjct 2951619 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 2951560 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || || | || || ||| Sbjct 2951559 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 2951503 Query 195130 AA 195131 || Sbjct 2951502 AA 2951501 >seq3 Length=6264253 Score = 89.7 bits (98), Expect = 1e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| || | |||||| | || || |||||||| Sbjct 4513892 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTG 4513951 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||| |||||||| || || || ||||| || || || || || |||||| Sbjct 4513952 CTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCT 4514003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481173543010