Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=4441427 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||||||||| ||||| ||||| || | | | || |||| |||| ||| Sbjct 1018611 GTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTG 1018552 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || | || |||||||| | || | || |||||||| |||||| Sbjct 1018551 CTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTT 1018492 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 || ||| | || | || | ||||| || | || || || |||||||| Sbjct 1018491 GGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGT 1018432 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 ||||||||| || |||||||||||| Sbjct 1018431 GAGAGTCTTGACGAAGATCTGCATA 1018407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||| ||||| || || || || | ||| |||| ||| Sbjct 1018844 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCTTCC 1018785 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || || || || || || |||||||| | || | |||||||| || | Sbjct 1018784 AACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGA 1018725 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| |||||| |||| || | ||| || ||| || || | || || || Sbjct 1018724 ATCTTAGTCTTGACGT----TATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGT 1018669 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||||||||| |||||||||||| Sbjct 1018668 CTTGCCGGTAAGAGTCTTCACGAAGATCTGCATA 1018635 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||| || |||||||| ||||| || ||| | || |||| |||||||| Sbjct 1018383 GTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTG 1018324 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||| || || || || || |||||||| | || | ||||||||||| |||||| Sbjct 1018323 CTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 1018264 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 || || || | ||||| ||| | ||| || || | ||| ||||| |||| Sbjct 1018263 GGTCTTCAC--AT--TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTC 1018208 Query 34954 CCGTGAGAGTCTTCAC 34969 | || || ||||| || Sbjct 1018207 CGGTCAGGGTCTTGAC 1018192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633481305840