Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq19 208 1e-48 seq1 134 3e-26 >seq19 Length=3504736 Score = 208 bits (230), Expect = 1e-48 Identities = 355/510 (70%), Gaps = 21/510 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| ||| ||| |||||| ||| Sbjct 125806 CTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 125865 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTC----AGGCCCATCTGTTC 47952 ||||||| ||||||||||| | ||| || | | ||| ||| ||| | Sbjct 125866 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCA------C 125919 Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||||| | |||||||| |||||||||| | |||| || || ||||||||| | Sbjct 125920 CAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAG 125979 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 || | ||||||| ||| | || || ||||||| ||| || ||||| || | | Sbjct 125980 CAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGAT 126039 Query 48073 AATCTGCTTAACG--CGGGACTCTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCAT 48129 ||| | | ||| | | ||| || | ||||| |||||| || | |||| Sbjct 126040 AATGTCTTCAACAACCTGTTTGCTGGGGCGGTTGTT---CAGGTG---GGAGAACAGCAG 126093 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || ||||| |||||| || ||||| || ||||||| ||||||||||| ||| Sbjct 126094 GCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 126153 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||||| || | || ||||||||||| || | ||||| ||||| |||||||| Sbjct 126154 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAA 126213 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || ||||| || ||| | || |||| | | | | |||| Sbjct 126214 GATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 126273 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 |||||| || ||||| || |||||||| Sbjct 126274 GATCCACTTAATGGCCCAATCGGCCTTCTT 126303 >seq1 Length=4441427 Score = 134 bits (148), Expect = 3e-26 Identities = 301/449 (67%), Gaps = 5/449 (1%) Strand=Plus/Minus Query 213793 TCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851 ||||||| |||| | ||| || | || ||||||||| ||||| |||||| || | Sbjct 2371009 TCCAGTCGCCGTTCGCCTCA-ACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAG 2370951 Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911 ||||| || | || || ||| ||| || ||| || || || || || || || Sbjct 2370950 AACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCG 2370891 Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCG 213968 |||| |||| |||||| ||||| | |||||||||||| || || | || | ||||| Sbjct 2370890 AAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCA 2370831 Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028 |||||||| || ||||| ||||||| | || || | ||| || || |||||| Sbjct 2370830 CCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTG 2370771 Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGC 214088 || |||||||| || | || || || |||| | | | | | || | || Sbjct 2370770 GAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGA 2370711 Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148 || || ||||||||| |||||||||||| ||||| | ||| ||| || ||| ||| Sbjct 2370710 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 2370651 Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG 214208 | |||||||| || | | || | | |||||| | ||||| ||| || | Sbjct 2370650 TCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTA 2370591 Query 214209 CCAGAGTTGAAAAGCGTGGGGCTGGCATG 214237 |||| |||||| || || ||| ||| || Sbjct 2370590 CCAGCGTTGAACAGAGTCGGGGAGGCGTG 2370562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532450675200