Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq3 100 3e-16 seq19 98.7 1e-15 >seq1 Length=4441427 Score = 118 bits (130), Expect = 1e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | |||||||| | | ||||| |||||||| | || | ||||| ||||||||| Sbjct 2371181 TGGTACGCTATTCTGGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTGTACAAGGAT 2371240 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 ||||| ||||||||||| ||||| ||||| | ||||| ||| ||||| || || ||| Sbjct 2371241 GCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGCTCCAACCTCTGC 2371300 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || || || | ||||||| | | ||||||| ||||| ||||| | || || | Sbjct 2371301 ACTGAGATCATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTT 2371360 Query 76058 GCCCTTCC 76065 |||||||| Sbjct 2371361 GCCCTTCC 2371368 >seq3 Length=6264253 Score = 100 bits (110), Expect = 3e-16 Identities = 161/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 |||||||| |||||||| || ||| |||| ||||| || ||||| || ||||| | Sbjct 1555077 GGTGCCAAAATCCCCCGTGGTGCCATTCTTTCGGGTCCTCCGGGTACCGGTAAGACGTTA 1555018 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTG-CTCTGCCGCAAA 175394 || ||| |||| || |||||||| || || ||| || |||| | || | | Sbjct 1555017 CTTGCCAAGGCCACGGCTGGTGAATCCGGCGTGCCCTTCTTC-AGTGTCAGTGGTTCGGA 1554959 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 ||||| ||||||||||| ||||| ||| | | ||||| ||||| || | | || Sbjct 1554958 GTTTGTCGAGATGTTTGTCGGTGTCGGTCCTTCCCGAGTTCGTGATCTGTTCGCCAACG- 1554900 Query 175455 CCGCGAAAATCAA--CCATGTATTGTCTTCATTGATGAGATTGATGC 175499 |||| ||||| | || || ||| ||||||| ||||| |||||||| Sbjct 1554899 -CGCGGAAATCGACGCCCTGCATTATCTTCATCGATGAAATTGATGC 1554854 >seq19 Length=3504736 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066 || || || |||| |||||||| | ||||| || || ||| | | ||| | ||| Sbjct 126318 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCG 126259 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||||||| |||| || |||| || || || |||||||||||||||||||| || Sbjct 126258 A-CCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTC 126200 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| | || | ||| | |||||||| ||||||||||| || || |||||| || Sbjct 126199 CTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAA 126140 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || || || || |||||||| ||| Sbjct 126139 CGAGCTCATCTCTCGTGACGAGGGTCTGCAC 126109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569376286400