Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 125 2e-23 seq11 113 1e-19 seq19 102 2e-16 >seq1 Length=4441427 Score = 125 bits (138), Expect = 2e-23 Identities = 404/624 (65%), Gaps = 5/624 (1%) Strand=Plus/Minus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 ||||||| ||| || | ||| | ||| | |||||||| || || | || | |||| Sbjct 2370989 ACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAGAACAGATCGCGGGC-TCTGAC 2370931 Query 155970 -TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 ||||| | ||||| ||||| || || || | ||| || | ||| | || || Sbjct 2370930 CTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGG 2370871 Query 156029 CTCCAGATACATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085 ||| || || || |||||| ||| | | | ||||||||||| || || || | || Sbjct 2370870 CTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGC 2370811 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 ||| || ||||| || | ||||| |||| || ||| ||||| || || ||||| || | Sbjct 2370810 AGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACC 2370751 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||| | || || | ||||| | || | | || ||||||||||| | || Sbjct 2370750 AATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACCAATACCACCGGCGGTCTT 2370691 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || || |||||| ||| | ||| | | | ||||| ||||| || || | ||| Sbjct 2370690 GGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCAT 2370631 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || |||| || | ||||| | || || ||||||||||| || || || Sbjct 2370630 GTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGG 2370571 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 | || ||| | || ||||| | ||||| | | ||| ||||| | |||||| | Sbjct 2370570 GGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGTCTCGATGGCCTTCTCGAT 2370511 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 | | ||||| |||| | | || | |||| || ||||| |||||||| | | Sbjct 2370510 GTCACTACCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCAC 2370451 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505 | ||| | || |||| ||||||| || ||||| || || || ||||| | | | Sbjct 2370450 CTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTA 2370391 Query 156506 CAGAAAATCACGGTTGTAATCAAT 156529 |||||||||| ||| |||| Sbjct 2370390 GTTGAAATCACGGTCGTATACAAT 2370367 Score = 84.2 bits (92), Expect = 6e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || | |||||| ||| ||||| || || |||||| || | ||||||||| Sbjct 2371320 CTGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGG 2371261 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 || || |||| |||||||||||||| || ||| | ||| | || ||||| |||| Sbjct 2371260 TTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGA 2371201 Query 155748 GCGTCCAGAAT 155758 || |||||||| Sbjct 2371200 GCCTCCAGAAT 2371190 >seq11 Length=4837238 Score = 113 bits (124), Expect = 1e-19 Identities = 180/252 (71%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 ||| || || ||||| ||| || || || ||||| |||||||| | ||| | | ||| Sbjct 609505 ACGTTGGATGTAACCGGTTTCAGCGGTCTTGACAGCGGTATCAATCAAACCTTCTCTACC 609564 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCA 302712 | |||| || |||||||| | ||| ||| || | || | || ||| || |||| Sbjct 609565 AGCCATGGCGTGGAAGAAGAACTCAGTGGGT-GTCAAACCACGCAGGTAAG-AGTTCTCG 609622 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 ||||| ||||||| ||||||||| | ||| |||||| ||||| |||| ||| | | | Sbjct 609623 ACGAATCCACGCGACTCGGGCGAGTAATCGTCCTTGGTGAAGTGAGGCAAGGTACGATAC 609682 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC-GAAATCAT 302831 | | ||| | || ||||||||||| || ||| ||| ||||| | ||| | | |||| Sbjct 609683 TTGAATCCGAAAGGAATACGCTTTCCTTCGACGGACTGTTGTCCGA-CCACAGCAGTCAT 609741 Query 302832 CTGCGAAATATT 302843 ||| ||||| || Sbjct 609742 CTGGGAAATGTT 609753 Score = 91.5 bits (100), Expect = 4e-13 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886 ||| |||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct 608722 ACGAGGAACACCCAAAGTGACGTT---CTTGGACGAGACACCAGCAAAGTGGAAAGTGTT 608778 Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946 || || | || || | |||||||||||| || || |||| || |||||||||||| Sbjct 608779 GAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGAGCAGCAAGCACACCAACCATTTC 608838 Query 301947 TCCTGG 301952 || || Sbjct 608839 ACCAGG 608844 >seq19 Length=3504736 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510 ||||| | || ||||| ||||| ||||||||||||| | ||| || ||| ||| Sbjct 126303 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 126244 Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570 ||||||||||| |||| || ||||| || || ||| || | ||| || || || Sbjct 126243 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTC 126184 Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630 ||||| || ||||||||| | | ||||| || || || ||||| || || || | Sbjct 126183 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 126124 Query 133631 GACGAGGCACTTCACACCGAATTTGC 133656 ||||||| || |||||||| || || Sbjct 126123 GACGAGGGTCTGCACACCGACTTCGC 126098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817034270110