Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq19 167 3e-35 seq4 118 1e-20 seq23 113 6e-19 seq1 109 7e-18 seq11 89.7 6e-12 >seq19 Length=3504736 Score = 167 bits (184), Expect = 3e-35 Identities = 182/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| ||| | ||||||||| Sbjct 125801 GCCTTCTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATC 125860 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 125861 GACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 125920 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| |||||||||||||||||||| ||||| || || ||||||||| | Sbjct 125921 AGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGC 125980 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || ||||| | || ||| ||||| | ||| || |||||||||||||||| Sbjct 125981 AGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATA 126040 Query 868931 AT 868932 || Sbjct 126041 AT 126042 Score = 114 bits (126), Expect = 2e-19 Identities = 142/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| ||| || |||||||| || ||||| Sbjct 126115 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTT 126174 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 126175 CTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAA 126234 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | ||| |||| || ||| ||||| |||| | | ||||||||| || ||||| Sbjct 126235 AGCAACGAGACGCTGAGCGAAG--GTCGACTCCCT-GTCCTGGATCCACTTAATGGCCCA 126291 Query 869359 GTCGGCCTTTTT 869370 |||||||| || Sbjct 126292 ATCGGCCTTCTT 126303 Score = 113 bits (124), Expect = 6e-19 Identities = 177/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | || ||| Sbjct 126451 GAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCAACGAGCCTCAGGAACCTGG 126510 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||| ||| ||| ||||| Sbjct 126511 ACCTCGCCGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAG 126570 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || || ||||| ||| |||| ||||||||||||| | | ||| ||||| | Sbjct 126571 AACGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCG 126630 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | || || | |||||||||||||||| || ||||||||||| ||| Sbjct 126631 TGCAAATCCTTGGACAGATCGATTTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTG 126690 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 126691 TACATCTGCCA 126701 >seq4 Length=5028727 Score = 118 bits (130), Expect = 1e-20 Identities = 121/157 (77%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || ||||| || ||||| || | || || || ||| Sbjct 1378707 GACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCCCGTCGGTCTTGGTGAG 1378648 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| |||||||||||||||||| ||||| |||||| Sbjct 1378647 CCCTGCTTCGACAAGCTGGAGGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 1378588 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 1378587 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 1378551 >seq23 Length=3271372 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| |||||||||||||| ||| ||| || || | || ||||| | || || ||| Sbjct 852026 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAAC 851967 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || || ||||||||||||||||| |||||| || ||| Sbjct 851966 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 851912 >seq1 Length=4441427 Score = 109 bits (120), Expect = 7e-18 Identities = 204/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| ||| || || || |||||||| || || |||||||| Sbjct 2370828 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 2370769 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||||| | | ||| | |||| | ||| | |||| || | || Sbjct 2370768 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 2370709 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | ||||||||| | ||||| || | ||||||||||| || || Sbjct 2370708 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 2370649 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| ||||| ||||| || | || || || | || || Sbjct 2370648 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACC 2370589 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || || || | || ||||| ||| | | ||||| || |||||| Sbjct 2370588 AGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 2370529 >seq11 Length=4837238 Score = 89.7 bits (98), Expect = 6e-12 Identities = 139/196 (71%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 1726961 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 1727020 ||| | || | |||||||||| || ||| ||||||||||| || || ||||| ||||| Sbjct 3890353 GACTCATCAATGTCGGGGTCGTTGATCAGACCCTTCCACCCCACTGTGGTGCGGGGCTTC 3890412 Query 1727021 TCGACATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCG 1727080 |||| ||||| ||||| | || || || ||||| || | ||||||| | || Sbjct 3890413 TCGAGGTAGGCACGCATAATAACACAGAGGTCGTCG--GAAAGCTTCTCGGAGA---GCT 3890467 Query 1727081 C--GCAGGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAA 1727138 | ||| || || |||| |||| | | | || |||||||| ||| || ||||| | Sbjct 3890468 CCTTCAGACGCTGGGCATATTCGAGGGCCGTGGCAGGGTCGTGGATCGAGCAAGGACCGA 3890527 Query 1727139 CGATAACCAGCAGCCG 1727154 | | ||||||||| || Sbjct 3890528 CAACAACCAGCAGACG 3890543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136738059510