Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq19 179 4e-40 seq1 140 3e-28 seq3 125 7e-24 >seq19 Length=3504736 Score = 179 bits (198), Expect = 4e-40 Identities = 345/505 (68%), Gaps = 9/505 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || || ||| ||| ||| || | Sbjct 125806 CTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 125865 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | || ||||| Sbjct 125866 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 125925 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 |||||||| |||||||| ||||||| ||||| || | |||||||||||||| || Sbjct 125926 GCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGC 125985 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || |||| || || | ||||||| ||||||| | || ||||| || ||| | Sbjct 125986 AACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATAATGTC 126045 Query 120591 --GAGCATAGTG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 | || || | || ||| |||| | | || | | | | |||||| || Sbjct 126046 TTCAACAACCTGTTTGCTGGGGCGGTTGT-TCAGGTGGGAGAACAG-----CAGGCAAGC 126099 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 ||||| |||||||| |||||||| || || || ||||||||| || || || || || Sbjct 126100 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGG 126159 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| || | |||||| |||| |||| || ||| ||| || ||||| | || Sbjct 126160 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACC 126219 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 ||| ||| || || || || | |||| || || |||| | | || | |||||| Sbjct 126220 CTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTGGATCCA 126279 Query 120828 CTTCATGGCCCACTCGGCCTTTTTG 120852 ||| |||||||| |||||||| ||| Sbjct 126280 CTTAATGGCCCAATCGGCCTTCTTG 126304 >seq1 Length=4441427 Score = 140 bits (154), Expect = 3e-28 Identities = 592/922 (64%), Gaps = 26/922 (3%) Strand=Plus/Minus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 ||||| ||||||||||||||| |||||||| || ||||| | | || || |||| Sbjct 2372136 GACTGAGACTGGTCAATGAACGCACCACGGTCCGCTGCCATCTGCAGGATCGTCCGCT-- 2372079 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 |||||||| |||||||||||||| |||||| | | ||| ||| | |||| Sbjct 2372078 -GGGAGATCTCCCACACCGTCTTGTACAGCGCCTTGATGTCACTGGGGATGTTGGGGATG 2372020 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| || || || | | |||| || | || ||| | ||||| | ||| | Sbjct 2372019 TTCTGGACGGAACCACCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCG 2371960 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || |||| |||||| | | ||| | | || |||||||| ||||| || || | || Sbjct 2371959 AGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACCACCTGGAACTCACCAGCCAAGACA 2371900 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || || | |||| || | || || || |||||||| |||||| ||||| Sbjct 2371899 CGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGA 2371840 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 ||| | || ||||||||| || ||||||| |||||| | ||| | Sbjct 2371839 CTGGTACTGGCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCG 2371780 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || ||| ||| ||||| |||||||||||||| | || || || |||||||||| Sbjct 2371779 ATCTTGGCCTTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCG 2371720 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||| || || || || | || |||||||| | ||| | |||| | || Sbjct 2371719 TACTGAAGGATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCC 2371660 Query 148530 GCCGCCAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 || || ||| | || || | | | ||| || || |||||| || || | Sbjct 2371659 TTGGCGAGATCGGACGAGGCGGTCAAAC-CAGCGTGATAGATGGTCTCGAAGATCTGGAT 2371601 Query 148589 GTTGAGCAG---CGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||| ||| | ||| | | | | ||| | |||| || || | || || || Sbjct 2371600 GTTCAGCTGTCTGGCCTCGGCCGAG---TCGAAGGGCAGGCGGAGAGCGAGGAAAGCATC 2371544 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 || || || | || |||| ||||||| ||||| | |||||| || Sbjct 2371543 AGCCAGACCGTTGACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGCCTC 2371484 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG 148764 | || || |||| |||| ||||||||||||| ||||| || || |||| |||| Sbjct 2371483 CGGGACGGGGTAGTAGTTGATGTCGATGATCTTGTTCAAG-TTACGGACCAAGACCTGGA 2371425 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCG------GT--T 148816 | | | ||| |||| || |||| | | | | | |||||| || Sbjct 2371424 CGACCTCGTGGAGCTTGCCAAAGTCATACTCG-CCGCGA-GCAGCATCGACGAAAGTAGG 2371367 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 | ||| | |||||| || ||||| || || ||||||||| || |||||||| | ||| Sbjct 2371366 AAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGAT 2371307 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 ||| | ||| || ||| || ||| || | |||||| || |||||||| |||| Sbjct 2371306 CTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTT 2371247 Query 148937 GCACGCGTCCTTGTACAGCATG 148958 ||| || ||||||||||||||| Sbjct 2371246 GCAAGCATCCTTGTACAGCATG 2371225 Score = 113 bits (124), Expect = 4e-20 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | | |||| | | | ||||| |||||||| || Sbjct 1018075 GTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCA-TCCTCCAGCTGCTTTCC 1018017 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||||||||||||||| ||||| || |||||| ||| Sbjct 1018016 GGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTT 1017957 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || ||| ||| ||| || |||| ||||| ||| |||||||| Sbjct 1017956 GACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 1017903 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| || || | | | ||||| | |||||| || Sbjct 1018604 GTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCCTCCAACTGCTTACC 1018546 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || ||||||||||||||||| ||||| ||| Sbjct 1018545 AGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGGTCTT 1018486 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| | || || || | |||| || || || || ||||| Sbjct 1018485 AACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGT 1018426 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 1018425 CTTGACGAAGATCTGCAT 1018408 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||||||| | ||| | | | || || | |||||| || ||| Sbjct 1018827 CTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCA-TCTTCCAACTGCTTACCAGCGA 1018769 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | ||||| ||||||||||| || || ||||| ||||| || ||||| ||||| | Sbjct 1018768 AGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGT 1018709 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| || || | | |||||| || | || | || |||||||| ||||| || | Sbjct 1018708 TATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCA 1018649 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 1018648 CGAAGATCTGCAT 1018636 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || ||| | || || ||||||||||| || || ||||| |||||| Sbjct 1018334 TCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 1018275 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||| | | || | ||||| | | |||||| || | ||||| | Sbjct 1018274 TCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATG 1018215 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || || |||||||| || || |||| Sbjct 1018214 GTCTTTCCGGTCAGGGTCTTGACGA 1018190 >seq3 Length=6264253 Score = 125 bits (138), Expect = 7e-24 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||||| ||| |||| || |||| || |||||||||||||||||| ||| ||| Sbjct 851956 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 851897 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| |||| || |||||| || ||| | | || || ||||||||||||||| Sbjct 851896 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCACGTCGGTGAC 851837 Query 116596 CTGGGCAAC 116604 || |||||| Sbjct 851836 CTTGGCAAC 851828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420618717200