Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq11 87.8 2e-12 >seq1 Length=4441427 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| |||| |||||| || | || |||| ||||||||| || || Sbjct 1018598 TCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAG 1018539 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||||| || | || |||||||| ||||| ||| | | Sbjct 1018538 ATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTA 1018479 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| ||||| || |||| |||||||| || ||||| | ||| || || Sbjct 1018478 TCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACG 1018419 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 1018418 AAGATCTGCAT 1018408 Score = 107 bits (118), Expect = 2e-18 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| || | || ||| || | || ||||||||||| || || || Sbjct 1018370 TCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAG 1018311 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||||| |||| || |||||||||| ||||| ||||| | | Sbjct 1018310 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTG 1018251 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | ||||| || |||||||| | ||||| || || || |||| Sbjct 1018250 TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCA 1018202 Score = 105 bits (116), Expect = 6e-18 Identities = 164/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||| ||||| | | | ||||| || | || |||||||| || |||||||||||| Sbjct 1018865 TTTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCG 1018806 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | | || || | || |||| ||||||||| || || || | ||||||||||||| Sbjct 1018805 GAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGG 1018746 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGAT 35683 |||| || |||||| || ||||| ||| | | | | || || |||| Sbjct 1018745 GGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTC--- 1018689 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||||| ||| ||||| || || || | ||| ||||| || |||||||| Sbjct 1018688 TCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 1018636 >seq11 Length=4837238 Score = 87.8 bits (96), Expect = 2e-12 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || ||||||||||| || || | Sbjct 2951681 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 2951622 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 | | |||||||| |||| || | | |||||||||| |||||| ||| | |||| Sbjct 2951621 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGAC-GTTG 2951563 Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||||||||| || || || | || || || |||||||| Sbjct 2951562 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGT 2951516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793430952400