Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741905.1_202016-09-21] 30 sequences; 35,983,474 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 113 5e-20 seq11 100 3e-16 >seq1 Length=4441427 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || |||||||| || || |||||||||||| Sbjct 1018634 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAC 1018575 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | ||| || || || || |||||||||||||| || || || Sbjct 1018574 AAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGG 1018515 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || |||||||| || || || || | ||||||||| ||||| || Sbjct 1018514 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACT 1018455 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || || || || | ||| || ||||| || ||||| Sbjct 1018454 TCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 1018408 Score = 111 bits (122), Expect = 2e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || |||||||||||||||||||||||||| | ||| | || || Sbjct 1018388 ACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 1018329 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| ||||||||| || || || ||||| || || || ||| Sbjct 1018328 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 1018269 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| || || ||||| || || || ||||| || Sbjct 1018268 ATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTT 1018209 Query 134685 CCGGTTAAAGTTTTAACGA 134703 ||||| | || || |||| Sbjct 1018208 CCGGTCAGGGTCTTGACGA 1018190 Score = 107 bits (118), Expect = 2e-18 Identities = 339/525 (65%), Gaps = 3/525 (1%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || ||| ||||| |||| || || || || || ||||| ||||| || ||| | Sbjct 2370466 CAGCACCTGCTGATGCGTGTTGCCGTTGGTATCCACGGTAGTGACATCGAGAAGGCCATC 2370525 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || ||||| ||||||| ||| | || || ||||| || || || |||| | Sbjct 2370526 GAGACCTACCACTTGATGTCCCAGAAGTACTTCACTCACGCCTCCCCGACTCTGTTCAAC 2370585 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || || || | |||||| | |||| || || | | |||| || |||||| Sbjct 2370586 GCTGGTACTCCCCAGCCTCAGCTTGCCTCTTGCTTCCTCGTCGACATGAAGGAGGACAGC 2370645 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803 || ||||| || ||| |||| || |||||| | || ||||| || ||| || Sbjct 2370646 ATTGACGGTATCTACGACACTTTGAAGACTTGCGCTATGATCTCCAAGACCGCCGGTGGT 2370705 Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863 || ||||||||||| || | | ||| | | ||| ||| | ||||||||| Sbjct 2370706 ATTGGTCTGAACGTGCACCGCATCCGCTCTACCGGATCTTACATTGGTGGCACCAACGGT 2370765 Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923 | ||| |||| | | |||||| | || || ||||| ||| | | || | || ||| Sbjct 2370766 ACCTCCAACGGTCTTGTTCCCATGCTTCGGGTTTTCAACAACACTGCCAGATACGTTGAC 2370825 Query 7924 CAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||||| || ||||| || || ||||||||| | ||||| |||||| |||| Sbjct 2370826 CAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACTCGGAT 2370885 Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGAT 8040 | | || | || | || ||| ||| ||| || || || ||| |||||| Sbjct 2370886 GTCTTCGAGTTCCTGGACCTCCGTAAGAACCACGGTAAGGAGGAGGTCAGAGCCCGCGAT 2370945 Query 8041 CTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTT 8085 || |||| | ||||| || |||||||| |||| ||| ||| Sbjct 2370946 CTGTTCTATGCCCTGTGGACTCCGGATCTGTTCATGAAGCGTGTT 2370990 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| || ||||||||||| | || ||| | || || Sbjct 1018087 ACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCC 1018028 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| ||||||||| ||||| || ||||| || || || || Sbjct 1018027 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGG 1017968 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || ||| || || || ||||| || ||||| || Sbjct 1017967 ATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTG 1017908 Query 134685 CCGGT 134689 ||||| Sbjct 1017907 CCGGT 1017903 >seq11 Length=4837238 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580 || |||| || ||||||||||||| | |||| | || || ||||| || || || | Sbjct 2951684 ATACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGA 2951625 Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 | || | |||||||||||| || || || || || || || || || || ||||| Sbjct 2951624 AGATAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGT 2951565 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 ||| | |||||| ||| || |||||||| |||||||| ||||| || | || || | Sbjct 2951564 TGTCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGA 2951505 Query 134701 CGAAA 134705 ||||| Sbjct 2951504 CGAAA 2951500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398210475600