Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq18 197 1e-45 seq14 132 5e-26 seq24 125 7e-24 seq7 98.7 1e-15 >seq18 Length=3504694 Score = 197 bits (218), Expect = 1e-45 Identities = 215/285 (75%), Gaps = 3/285 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||| Sbjct 126716 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTG 126657 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | ||| |||||||| |||||||| | |||||| Sbjct 126656 TCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCC 126597 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||| ||| ||| ||||| ||||||||||| || |||||||| Sbjct 126596 CACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGC 126537 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||||| | ||||| || ||||||||||| || |||||| ||| Sbjct 126536 TTCAGCGGCGAGGTCCAGGTTCCTGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATG 126477 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | || || ||| ||||| || ||| Sbjct 126476 GAGAACATCCACTCCGAGACCTACTCTCTCCTGATCGATACCTAC 126432 Score = 188 bits (208), Expect = 7e-43 Identities = 304/437 (70%), Gaps = 0/437 (0%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | |||||| | ||| ||| | |||||| |||| | Sbjct 126314 AGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTC 126255 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||| ||||| ||||| ||||||| || ||| ||||| |||| || | Sbjct 126254 TCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCT 126195 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || |||||||| || || || ||| ||||||||||||||| | | Sbjct 126194 GGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTG 126135 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||||||||| |||||| || || |||||||| || || | || || | Sbjct 126134 ACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCA 126075 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | || || || || ||| || |||| ||| |||||| ||||| | Sbjct 126074 GCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGA 126015 Query 117282 CCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCG 117341 | || || ||||| || ||||||||| | || | | | ||||| || ||||||| Sbjct 126014 CTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCG 125955 Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401 |||| ||||| ||| | |||||| | | || | | | ||| |||||||| | ||| Sbjct 125954 AGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCACCA 125895 Query 117402 ACCCGCTGGACTTTATG 117418 |||| | ||||| ||| Sbjct 125894 ACCCCTTCGACTTCATG 125878 >seq14 Length=4837378 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| || ||||| ||| |||||||||| | | ||||| | | Sbjct 2951562 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2951621 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| ||||| |||||| |||| ||||| || || Sbjct 2951622 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCT 2951680 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 2951681 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 2951740 Query 40878 GG 40879 || Sbjct 2951741 GG 2951742 >seq24 Length=3695433 Score = 125 bits (138), Expect = 7e-24 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| |||| ||||| ||| ||| | | | | |||| ||||| Sbjct 2677615 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACG-TCAAG 2677557 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | || || ||||||||||| | |||||||| || || |||| ||| || Sbjct 2677556 ACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGA 2677497 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || |||||||| || | ||||| || | ||||||||||||||||||||| | || || Sbjct 2677496 AAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTC 2677437 Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || | ||| || | || || Sbjct 2677436 CATCTTGTCCTCCGCCTGCGTGGTGG 2677411 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || || | || || || | | Sbjct 2676880 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 2676821 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| || || |||||||| ||| ||||||| Sbjct 2676820 GATACCATTGATAACG-TCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCA 2676762 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | || || ||| ||| ||||| Sbjct 2676761 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAA 2676702 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| ||| ||||| || ||| Sbjct 2676701 CATCCAGAAGGAGAGCACTCTGCACCTGGTG 2676671 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || ||||| | || || ||| | || Sbjct 2677108 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 2677049 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| || ||||||||| ||||||| Sbjct 2677048 GACACAATTGATAACGTT-AAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCA 2676990 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || ||| |||| || | || ||| | ||||||||| Sbjct 2676989 GCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 2676930 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| || || || || Sbjct 2676929 CATCCAGAAAGAATCCACTCTTCACCTTGT 2676900 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || || || || || ||||||||| | || || || | | |||| | Sbjct 2677329 TAGTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCA 2677270 Query 40757 TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGAC 40816 | | | | ||| || |||| ||||| |||||||| ||| |||||||||| || | Sbjct 2677269 TCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTC 2677210 Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876 | |||| ||| || || |||||||| || | || ||||| ||||||||||| || | Sbjct 2677209 TGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAA 2677150 Query 40877 AGGAGGCCACGCTGCATCTAGT 40898 |||| |||| || || || || Sbjct 2677149 AGGAATCCACCCTTCACCTCGT 2677128 >seq7 Length=6264467 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| |||||||||| || || |||| ||| || || ||||| || Sbjct 1750268 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 1750327 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || || ||||||||||||||||||||| |||| || || | ||| | Sbjct 1750328 GACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTC 1750387 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 1750388 CGCCTGCGTGGTGGTGG 1750404 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 139382 GGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGAGCAC 139441 ||||||||||| ||| ||||||| ||| | |||||| ||||| || || ||| ||| Sbjct 5412355 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 5412414 Query 139442 TTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGA-GATCAGGCACGTCGGCGA 139500 ||||||||| || | |||||| || ||||| | ||| || | | |||||||| || Sbjct 5412415 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGC-GTCACGTCGGTGA 5412473 Query 139501 CCTGGGCAACCTCGAG 139516 ||| |||||| || || Sbjct 5412474 CCTTGGCAACTTCAAG 5412489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219006792800