Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq24 244 9e-60 seq18 136 4e-27 >seq24 Length=3695433 Score = 244 bits (270), Expect = 9e-60 Identities = 493/729 (68%), Gaps = 2/729 (0%) Strand=Plus/Plus Query 23249 TACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTG 23307 ||||| | ||| | ||||| || ||| ||||||| ||| || |||| ||| || | || Sbjct 1324419 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACA-TCAGCCAAGCCAGGGGCTTC 1324477 Query 23308 CATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGG 23367 | || || | ||| |||| || ||||| || |||| || |||||||| Sbjct 1324478 GTTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGG 1324537 Query 23368 TATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTT 23427 |||| || || |||||||| |||||||| | |||||||| || ||| |||||| Sbjct 1324538 AGTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACG 1324597 Query 23428 CAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCC 23487 | |||| || || || || |||| ||||| ||||| ||||| | |||||| || || Sbjct 1324598 GAGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACC 1324657 Query 23488 CGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCAT 23547 || | ||| ||||| ||||| || ||||| | ||| ||||||||| | || | ||||| Sbjct 1324658 GGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCAT 1324717 Query 23548 CGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAAC 23607 || || ||||||||||| | ||| ||| | | || || | | || | Sbjct 1324718 GGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGAT 1324777 Query 23608 GTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAG 23667 | ||| |||| | ||| || || ||| | | || || ||||| ||||| |||| Sbjct 1324778 GCGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAA 1324837 Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727 |||||||||||| || || ||||||||||| || | |||| | ||| || || | | Sbjct 1324838 AGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAG 1324897 Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787 || | | ||| ||| | || |||||| |||||| |||||| || ||||| | Sbjct 1324898 CTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTG 1324957 Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847 ||||| | | ||| || |||||||| || ||||| ||||| ||||| | ||| Sbjct 1324958 GGACATCAAGTGGTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGC 1325017 Query 23848 GACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATA 23907 || ||||||| || || || || | ||| || ||||| || ||||| || Sbjct 1325018 AACACGCATCAGCAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTA 1325077 Query 23908 TGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTAT 23967 ||| || | || || || || || || ||| ||||| || ||||| |||| || || Sbjct 1325078 TGACCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTAGTTGAAATCACGGTCGTATACAAT 1325137 Query 23968 GGCCGAATT 23976 ||||| || Sbjct 1325138 AGCCGAGTT 1325146 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || |||||||| | || |||||| | ||| Sbjct 2677108 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 2677049 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || |||| | | || ||| | | ||||||||||| | || || ||||| Sbjct 2677048 GACACAATTGATAACGTTAAGACCAAGATTCAAG-ACAAGGAAGGCATCCCCCCGGACCA 2676990 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || |||||||| || |||||||| || || || ||| || || Sbjct 2676989 GCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 2676930 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || |||||||| |||||||| || || ||| | || | || |||| Sbjct 2676929 CATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 2676880 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || || || |||||| | || || || | || |||| ||| Sbjct 2677326 TCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCG 2677267 Query 31263 AAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 | | || || || ||| | ||||||||| ||| | || || |||||||||||||| Sbjct 2677266 ACAATGTGAAGACCAAGATTCA-GGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTG 2677208 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || |||||||| || ||| |||| || || || || || ||||||||||| Sbjct 2677207 ATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAG 2677148 Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || || ||| | ||| | || |||| Sbjct 2677147 GAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTA 2677108 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| ||||| || | || || || || Sbjct 2676880 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 2676821 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | ||||| || ||| | | | ||||| ||| | || || ||||| Sbjct 2676820 GATACCATTGATAACGTCAAGACTAAGATTCAAG-ATAAGGAGGGCATTCCCCCGGACCA 2676762 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||||||||| || |||||||| || ||||||||||| | | | || | |||||| | Sbjct 2676761 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGA-TGGACGTACGCTCTCCGATTACA 2676703 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || ||||| || ||||| || Sbjct 2676702 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGCT 2676669 >seq18 Length=3504694 Score = 136 bits (150), Expect = 4e-27 Identities = 331/494 (67%), Gaps = 18/494 (4%) Strand=Plus/Minus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTC 57965 || ||||||||||| || ||| | || || ||||| | | || || | || ||| Sbjct 126321 ATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAG---GACAGGGAGTCGACCTTC 126265 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 || || | || | || ||||| ||||| || ||||| ||||| || ||| ||| || Sbjct 126264 GCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCT 126205 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| | ||||| || || || ||||| || || || || ||||||| | Sbjct 126204 TCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTC 126145 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC 58145 || || || ||||||||||| || || || || || ||||| ||| ||| ||| | Sbjct 126144 ATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCT---- 126089 Query 58146 AATAAACCGACGCGG--GATCGCATCTTG--GACATTATCACCGAGGCGGTCGCGATCGA 58201 | ||||| | | | | | | ||| ||||||||| |||||| |||| || || Sbjct 126088 GAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGA 126029 Query 58202 AAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGAT 58261 | ||||| | || || || || || || || |||| || |||||| | |||| Sbjct 126028 GCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGAT 125969 Query 58262 GTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGT 58319 || ||||||| |||||||| || ||| | || || | | || | ||| || Sbjct 125968 GTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGA-AGT 125910 Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379 | |||||| | | || || || || || ||| | ||||||||| | ||| ||||| Sbjct 125909 -ACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACC 125851 Query 58380 AACTTTTTCGAAAA 58393 ||||| ||||| || Sbjct 125850 AACTTCTTCGAGAA 125837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766232837600