Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq18 113 4e-20 seq24 86.0 6e-12 >seq18 Length=3504694 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||||| |||||| | ||||| | || |||||| | ||||| | || ||||| Sbjct 126045 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGC 125986 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||| | | ||||||| |||||||||||||||| |||||| | ||| || || Sbjct 125985 ATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCC 125926 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||| ||||| || || |||||||| || ||| | || ||| Sbjct 125925 CTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCG 125866 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||| || || ||||| ||||||| || || || || ||| Sbjct 125865 CTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGAGACTAC 125821 >seq24 Length=3695433 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || || || ||||||||||| || || | Sbjct 2677110 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 2677169 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || || ||||| || ||||| |||||||||| ||||| || || || Sbjct 2677170 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 2677229 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| | || || || | | || | ||||| | | |||||| Sbjct 2677230 ATGCCCTCCTTGTCC-TGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 2677288 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATA 139757 ||||| ||| | ||||| ||||||| || || |||| || Sbjct 2677289 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGACTA 2677329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063813976000