Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq7 201 2e-47 seq13 192 9e-45 >seq7 Length=6264467 Score = 201 bits (222), Expect = 2e-47 Identities = 224/294 (76%), Gaps = 4/294 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | || || |||||||| || ||||||||||| |||| Sbjct 1298652 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 1298594 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||| |||||||| ||||||||| |||| | || |||| ||||||| Sbjct 1298593 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 1298534 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| |||| | ||| ||||||| || |||| |||| |||||| || ||| || | Sbjct 1298533 CTCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCATCCGTGATGCCGTCACCTACACTG 1298474 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||||||| | || | ||||| || | || || || | Sbjct 1298473 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTCAAGCGCCAGG 1298414 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATCAAAC-TTCGAATGGA 16723 |||||| | || ||||| || ||||| | || |||| | |||||| ||| Sbjct 1298413 GCCGTACCCTGTACGGTTTCGGTGGTTAAATTGCT-TTCAACCATTCGAAAGGA 1298361 >seq13 Length=5028896 Score = 192 bits (212), Expect = 9e-45 Identities = 193/248 (78%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||| ||||| |||| Sbjct 1705089 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 1705147 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 1705148 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 1705207 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| |||||| || || |||| ||| ||| || ||| || | Sbjct 1705208 CCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTG 1705267 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||||||| | || |||||||||| | || | || | Sbjct 1705268 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGG 1705327 Query 16671 GCCGTAAG 16678 |||||||| Sbjct 1705328 GCCGTAAG 1705335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075172570790