Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq18 156 9e-33 seq7 123 5e-23 >seq18 Length=3504694 Score = 156 bits (172), Expect = 9e-33 Identities = 311/452 (69%), Gaps = 18/452 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| ||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 125840 TCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 125899 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || |||||||| | Sbjct 125900 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCCGCGACAAACTCGATG 125959 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||| | || | | || | || ||| | | Sbjct 125960 TACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGG 126019 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC----ACCTG-TGCCAGAG 251797 || |||| || || | || ||||| | | || || |||| ||||| | | | | Sbjct 126020 AACTCCTGCTCAATGCCGACGGCCTCGACGATAA-TGTCTTCAACAACCTGTTTGCTGGG 126078 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCG 251856 | | ||||| ||| | ||| |||| | || || || | | ||||||||||||| Sbjct 126079 GC-GGTTGTT---CAGGTGGGAGAACAGCAGGCAAGCGAAGTCGGT-GTGCAGACCCTCG 126133 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||||| ||||||||| | || |||||||| | ||||| ||| ||||| Sbjct 126134 TCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGC 126193 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACA 251976 |||||||| | ||||| || ||||| | | |||||| || | | ||||| Sbjct 126194 CAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACG 126253 Query 251977 AGGCGCTCAGCAAA---CGACT---TGTCCTG 252002 || |||| ||| || ||||| ||||||| Sbjct 126254 AGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 126285 >seq7 Length=6264467 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || || |||| ||||||||||| ||| Sbjct 5687710 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAAC 5687651 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||| ||||| | |||||||||| | || || ||||| |||| ||||| || | Sbjct 5687650 CAGACCAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC 5687591 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 5687590 GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 5687531 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 |||||| | ||| || || || ||||||||| Sbjct 5687530 GATGAGGTCAAGACCGTCTACGTCGAGCACGAC 5687498 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205 ||||| || || ||| || |||| ||||| || ||||| ||||| ||||| |||||| Sbjct 5686909 CAGGTCTCCCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCTACC 5686850 Query 280206 CTAATCAAAGTCCTGACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCAT 280262 || |||| |||||||| || ||| | || |||||| | ||| | |||| Sbjct 5686849 CTGGTCAACGTCCTGACCGGTGAGTTGATCCCCACCACTGGTGA---CGTCTACCAGCAC 5686793 Query 280263 CCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTG 280322 ||||| || || || ||| || |||||||||||| ||||| || |||||||| Sbjct 5686792 GAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCTCACATTGATAACCACCTC 5686733 Query 280323 GACATGACTCCTAACCAATACATTCAGTGGCG 280354 || ||||| | | ||||| |||||||| Sbjct 5686732 GATTCCACTCCCTCCGAGTACATCCAGTGGCG 5686701 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/133 (76%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCC--ATTCTACTGCGTG 279759 || || || ||||||||||||||||||||||| || | || ||| ||| | | | Sbjct 5687350 TCCCTCTCCGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTCTTCGAGTCC--C 5687293 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 ||||| |||| ||||| |||||||| ||||||||| ||||| || ||||| |||||| Sbjct 5687292 CCGATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCCTGGT 5687233 Query 279820 TAGTGTCCTACCT 279832 | | | |||||| Sbjct 5687232 TGGAGAACTACCT 5687220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836404925230