Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq18 118 1e-21 seq24 113 4e-20 seq14 98.7 9e-16 seq7 89.7 5e-13 >seq18 Length=3504694 Score = 118 bits (130), Expect = 1e-21 Identities = 296/445 (67%), Gaps = 31/445 (7%) Strand=Plus/Minus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 |||||||| ||| ||||| |||||||||| ||| ||| || | || || | | Sbjct 126249 GCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGGCTC 126190 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||| || ||||| || ||||||||| ||||| | ||||| Sbjct 126189 AAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 126130 Query 47268 GGCCTGCACACCAACTT----TGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTT 47323 || ||||||||| |||| |||||| || | || | || || || ||| | Sbjct 126129 GGTCTGCACACCGACTTCGCTTGCCTG-CTGTTCTCCCAC-CT------GAACAACCGCC 126078 Query 47324 GGACGTGCCCACCGTCAGC----GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGT 47379 | || || | | ||||| | | ||| ||||||| ||||||| ||||| Sbjct 126077 CCA---GCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAGGAGT 126021 Query 47380 TTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGT 47439 | | | || |||||||||| || | |||| |||||| | || ||||| | ||| Sbjct 126020 TCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGT 125961 Query 47440 ACATCGAATTTGTCGCCGACCGCCTGCTCGT-----TCAGCTA-AAGTATCCCAAGATTT 47493 ||||||| |||||||| ||||||||||| || || || | ||| ||| | Sbjct 125960 ACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAG------AAGTACT 125907 Query 47494 ACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACT 47553 || || || || || ||||| || ||| | || ||||| | ||| |||||||||| Sbjct 125906 ACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACT 125847 Query 47554 TTTTCGAGAAGCGCGTCGGCGAATA 47578 | ||||||||||| || || || || Sbjct 125846 TCTTCGAGAAGCGGGTAGGAGACTA 125822 >seq24 Length=3695433 Score = 113 bits (124), Expect = 4e-20 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || | | |||||| ||| || ||||| ||||| Sbjct 2677441 GTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCG 2677500 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| |||||||| ||||||||||| ||| ||| || |||| Sbjct 2677501 GCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTTG 2677560 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| ||| || | |||||| |||| ||| | || |||||||| Sbjct 2677561 ACGTTG-TCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 2677613 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||||||| | ||| || ||| || | ||| || |||||| | Sbjct 2676689 CTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAA 2676748 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | |||||||| || || || ||||||||||| || || || ||||| | Sbjct 2676749 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTT 2676808 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||| |||| ||||| || || | || | ||| |||||||| ||||| || || Sbjct 2676809 ATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCAC 2676868 Query 127102 AAAAATCTGCAT 127113 || |||||||| Sbjct 2676869 GAAGATCTGCAT 2676880 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || |||||||| ||||| || || || || ||| || ||||| |||||| Sbjct 2677140 GTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCA 2677199 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| || || || ||||||||||||||| || || ||| Sbjct 2677200 GCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTC 2677259 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | | ||| || || | ||| | || || |||||||| || Sbjct 2677260 ACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTC 2677319 Query 127097 TTTAC 127101 || || Sbjct 2677320 TTGAC 2677324 >seq14 Length=4837378 Score = 98.7 bits (108), Expect = 9e-16 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || |||||| |||| Sbjct 2951740 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 2951681 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | ||||||||||| || || || |||||||||||| ||| || ||||| |||| || Sbjct 2951680 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 2951622 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || || || || || || || Sbjct 2951621 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 2951562 Query 127105 A 127105 | Sbjct 2951561 A 2951561 >seq7 Length=6264467 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 50662 GTTGCCCAGATCGCCGACGTGGCGGTCGACGGCGTTGGGAGCGCCGTGGTTGCGGCCCAA 50721 |||||| || || |||||||| || ||| || | | |||||| |||||| | ||| || Sbjct 5412483 GTTGCCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 5412424 Query 50722 CGGATTAAAGTGCTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAATTCGTGCAC 50781 || || ||||| ||| || || |||||||||||| | |||| ||||| | ||| || Sbjct 5412423 GGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 5412364 Query 50782 GTGGAACCC 50790 |||||| || Sbjct 5412363 GTGGAAGCC 5412355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500621687200