Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7 383 2e-101 seq23 136 5e-27 seq15 89.7 7e-13 seq24 86.0 8e-12 >seq7 Length=6264467 Score = 383 bits (424), Expect = 2e-101 Identities = 767/1134 (68%), Gaps = 11/1134 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| || || ||||| | || ||||| || || |||||||||||||| Sbjct 3895064 TCACCAGACAGGATAGCAGCCTGGACGGCAGCACCGTAGGCAACGGCCTCATCGGGGTTG 3895123 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || || || ||| || | || | | | || || || ||| Sbjct 3895124 ATGGACTTGTTGGCGTCCTT---GTTGAAGAAGTCACTGACGAGACGCTGGATCTTGGGG 3895180 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||||| ||||| || | || || || |||||||| | | Sbjct 3895181 ATACGGGTGGAACCACCGACCAGGACGATCTCGTGGACGGAGGACTTGTCGATCTTGGCG 3895240 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| |||||| | |||| || || ||| Sbjct 3895241 TCACGGAGGACACGCTCGACGGGCTCCATGGTGGAACGGAAGAGGTCCTGGCAGAGCTCC 3895300 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| ||||| || ||||| || | || ||| | | || || || Sbjct 3895301 TCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCGATC 3895360 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||||| || || || | ||||| | || ||||| || ||||| || || || || Sbjct 3895361 TCAATGGAGGTCTGGGCAGCGGAAGAGAGGGTACGCTTGGCACGCTCGCAAGCGGTGCGG 3895420 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | || ||||| || || || || ||||| Sbjct 3895421 AGACGACGGAGAGCACGAGCGTTGGAGGTGAGGTCCTTCTTGTGCTTGCGCTTGAACTCG 3895480 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||| | ||||| || |||||||||||||| || || || Sbjct 3895481 TTGACGAAGTGGTTGACGAGGCGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCA 3895540 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | | | || ||||| || ||| Sbjct 3895541 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAGGAGGGAGACATCGAAGGTA 3895600 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 |||||||| || || || ||||| ||||| || | || ||||| || |||||| Sbjct 3895601 CCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACCCTCGGCCTTCTTGTCCAGACCG 3895660 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || || || || || || || || || || || ||||| ||| ||||||||| ||||| Sbjct 3895661 TAGGCAATGGCAGCAGCGGTGGGCTCGTTGATGATACGGAGAACGTTCAGGCCGGCAATG 3895720 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || || || || || || ||||| |||||||| ||||| || | | Sbjct 3895721 AGACCAGCATCCTTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACAGTGATG 3895780 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| |||| | |||||| || | || ||| | || ||| ||||| || Sbjct 3895781 ACAGCGTTGTTGACGGTGCCACCGAGGTAGGCCTCAGCGGTCTCACGCATCTTGGTGAGG 3895840 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || | ||| || | | ||||| || || || || || || ||||| || Sbjct 3895841 ATCATGGAGGAGACCTCCTCGGGGGTGAACTGCTTGGTCTCGCCCTTGAACTCAACCTCG 3895900 Query 7850 ATCATGGGTTTATC-CGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 | ||||| || | | | | | || |||||| | | ||| | ||||| || Sbjct 3895901 ACGATGGGCTTGCCACCCTTCTC----GACAACCTTGAAGGGCCAGTGCTTCATGTCAGA 3895956 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| ||| | ||| | ||||| |||||||| ||||| || || ||||| Sbjct 3895957 CTGGACCTCAGCGTCGGCAAAACGACGACCGATCAGACGCTTAGCATCGAAGACGGTGTT 3896016 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 | ||||||||||| |||||||| || || || ||||| ||||| || | || Sbjct 3896017 GTGAGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---GGTGTC 3896073 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || || ||| | || ||||| || || || || |||||||| || || ||||| | Sbjct 3896074 GGTGAAAGCCACGAAAGAGGGGGTAGTGCGGTTACCCTGGTCGTTGGCGATGATTTCAAT 3896133 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 |||||| | | |||| || || || || || || ||||| ||||| ||||| Sbjct 3896134 GCGGTCATCACGGAAGACACCCACACAGGAGTAGGTGGTTCCCAAATCGATACC 3896187 >seq23 Length=3271484 Score = 136 bits (150), Expect = 5e-27 Identities = 357/542 (66%), Gaps = 7/542 (1%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| || ||||| || |||||||| ||||| | || ||| || |||| ||| | || || Sbjct 2128915 CAGATCTTCAAAGCGAGCACGGGTGATGGAGGAATTGAAGTCCTCGCCATCGAACAAAGA 2128974 Query 7303 ATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 || ||||| | || || || | ||| | || || || ||||| || ||||| || Sbjct 2128975 GTCGATTTCCACAGTGGTCTGGGTAGCGTTG--GACAAAGTACGCTTAGCACGCTCGCAA 2129032 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || |||| | ||||| ||||| | || || || || | || || | || || Sbjct 2129033 GCGGTTCTGAGGCGACGGAGGGCTCTCGCGTCTCCAGAGAGGTCCTTGCCAGTCTTGCGC 2129092 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| | |||||| ||||| | | ||| || |||| ||||| | ||| Sbjct 2129093 TGGAACTCCTTCTTGAAGTGGTCCAGGAGGTTGGTATCAAAGTCTTGTCCACCAAGGTGG 2129152 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 ||||| || || || || || || |||| ||| |||| ||||| | | || ||| Sbjct 2129153 GTATCTCCGGCAGTAGCCTTAACAGTGAAGACACCACCTTGGATGTTAAGGAGAGACACA 2129212 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTC 7597 || || ||||||||||| || || | || || ||||| || | || ||| Sbjct 2129213 TCGAAAGTACCACCACCAAGATCGTAGATAAGAACGTTACGCTCCTTATCAGACTTGCCG 2129272 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 | || || || || || || || || || || || || || ||||| || ||| Sbjct 2129273 GAGCCAAGGCCATAAGCAATTGCTGCTGCAGTGGGCTCGTTGATGATACGGAGCACGTTG 2129332 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 || |||||||| | | ||||| || || || || || || ||||| || || || Sbjct 2129333 AGACCAGCAATGGCACCAGCATCCTTAGTAGCCTGGCGCTGGTTGTCGTTGAAATAAGCG 2129392 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 || || || | ||| || | | ||| ||||| ||||| | | |||||||| |||||| Sbjct 2129393 GGCACGGTGATGACTGCCTTCTCGACCTTCTTTCCGAGTTTGGTTTCCGCGACCTCTTTC 2129452 Query 7778 AT 7779 || Sbjct 2129453 AT 2129454 >seq15 Length=4144552 Score = 89.7 bits (98), Expect = 7e-13 Identities = 125/175 (71%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 7971 TGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCG 8030 ||||||| ||| ||||||||| || ||||| |||| || ||||| | || | | Sbjct 3069313 TGGGGTTGGCGGCGTATTGGTTCTTAGCGGCGTCACCGACCAGGCGTTCCTCAT---CGG 3069257 Query 8031 TAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGC 8090 | || |||||||| || ||||| | || || |||||||||||| | | |||||| || Sbjct 3069256 TGAAAGCGACGTATGAAGGGGTGATACGGTTTCCTTGGTCGTTCACGAGAATTTCGACCT 3069197 Query 8091 GGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | || ||| || ||||| || || || || ||||| | ||||||||| || Sbjct 3069196 TTCCATTCTGCATAACACCGACACAGGAGTAGGTGGTTCCCAGATCAATACCAAT 3069142 >seq24 Length=3695433 Score = 86.0 bits (94), Expect = 8e-12 Identities = 342/533 (64%), Gaps = 9/533 (2%) Strand=Plus/Plus Query 105466 TATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGA 105525 || |||||||| || | || ||||| | |||||| || || | | || || | Sbjct 1324419 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 1324478 Query 105526 TCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGA 105585 | || || |||| | ||| | || | | ||||| || |||||||||| ||| ||| Sbjct 1324479 TTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGA 1324538 Query 105586 ATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGA 105645 |||||| ||| | || || || || || |||| || | ||| || ||| ||| Sbjct 1324539 GTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGG 1324598 Query 105646 ATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCT 105705 | || || || |||| | ||| | |||||| || || | |||| |||| || || Sbjct 1324599 AGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCG 1324658 Query 105706 TTACGAC----GCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACAT 105761 ||| ||| | || | | || ||||| || || ||| | || || | ||| Sbjct 1324659 GGACGCTTGTTGCCACCCTGG-TCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCAT 1324717 Query 105762 TGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTAC 105821 |||| || ||| | ||| || || || || |||| ||| | ||| | | || | Sbjct 1324718 GGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGAT 1324777 Query 105822 ATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATAC--GCGCACACTCTTTT 105879 ||| |||| | |||||||| || || ||| ||| ||||| | |||| Sbjct 1324778 GCGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCA-AGTCTTCA 1324836 Query 105880 ACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGAC 105939 | || ||||| |||||||| || || || ||||| | | | ||||| || || | Sbjct 1324837 AA-GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCA 1324895 Query 105940 ATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAA 105992 | || || ||| |||||||| ||||||||||| || | || ||| |||| Sbjct 1324896 AGCTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA 1324948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132561825200