Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq18 100 3e-16 seq7 96.9 4e-15 seq13 86.0 7e-12 seq1 84.2 3e-11 seq22 82.4 9e-11 >seq18 Length=3504694 Score = 100 bits (110), Expect = 3e-16 Identities = 150/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||||||||| || |||| || ||||||||||| || Sbjct 126122 TGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCA 126181 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| | || || || |||||||| ||||| || Sbjct 126182 CGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCA 126241 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683 |||||||| | ||||||| ||| |||||||| | |||| || |||||| | || Sbjct 126242 GCGAAAGCAACGAGACGCTGAGC-GAAGGTCGACTCCCTGTCCTGGATCCACTTAATGGC 126300 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||| | |||||| | ||||||||||| Sbjct 126301 CCAATCGGCCTTCTTGGCAATGCAGGGGAC 126330 >seq7 Length=6264467 Score = 96.9 bits (106), Expect = 4e-15 Identities = 222/327 (68%), Gaps = 8/327 (2%) Strand=Plus/Minus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGT-TGGTTGGCACGTGCCTG 11732 ||||||| ||| ||||| ||||||||||| | || || || | | | | || || | Sbjct 4709461 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTC-CGCGCGTT 4709403 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || ||||| || || | || ||||| || |||||||| || || | | Sbjct 4709402 GGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTCCGA 4709343 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || |||||||| |||||| || || |||||||| |||| || || | | Sbjct 4709342 ACCACTGACACTGAA-GAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGTAACG 4709284 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909 ||||||| ||||| || | ||| | |||| ||| ||||||||||| |||||||| || Sbjct 4709283 TCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACCCAGCT 4709224 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | |||| || || ||||| |||||| || | ||| | |||| |||| || Sbjct 4709223 TC--TGGAAGCGTTCCGGGTTCTTCAGGAAGCTGACGAATTCCATGATTTCCACCTTAGC 4709166 Query 11970 GGAGTCGATACCCTCAACATCGGTGAA 11996 || ||||| | || |||| ||| Sbjct 4709165 TTCATCCATACCAGCCACGTCGGAGAA 4709139 >seq13 Length=5028896 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 1453264 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 1453205 Query 136776 TGGGAACAGCTTTTAGATATATTTT 136800 ||||| || ||||| | | | |||| Sbjct 1453204 TGGGACCATCTTTTTGCTTTTTTTT 1453180 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 599336 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 599277 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 599276 TGGGACCATCTTTT 599263 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 600086 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 600145 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 600146 TGGGACCATCTTTT 600159 >seq1 Length=759789 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 570766 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 570707 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 570706 TGGGACCATCTTTT 570693 >seq22 Length=4157665 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 770325 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 770384 Query 136776 TGGGAACA--GCTTTTAGATATATTTTTT 136802 ||||| || ||||| | | | |||||| Sbjct 770385 TGGGACCATCTCTTTTTGCTTTCTTTTTT 770413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975779134000