Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq18 82.4 6e-11 >seq18 Length=3504694 Score = 82.4 bits (90), Expect = 6e-11 Identities = 184/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 30117 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATG 30176 |||||| || ||| || ||||| || | | | ||| || || || |||||||| Sbjct 1615395 CTGATCGACACCCTGACCAGAGTAATCCGTCTTGGCGTCGACATATTCCGCCCCGAAATG 1615336 Query 30177 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 30236 ||||||||||| |||||||| || || ||||| || |||| | |||| ||| || Sbjct 1615335 TCTCCACTGGAAGCCGTACACGGGACCGAGGTCGCCGACTTCGCGGTGC-GAAAGACCGA 1615277 Query 30237 C-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGGA 30293 | ||||| | | || | ||| || ||| | |||||||| || | ||| |||| | || Sbjct 1615276 CTTTGTCGAGGTATTCGCGGGAGCCATTGCCATCCCAGATTTTGATCCCGGCTTCGCTGA 1615217 Query 30294 -GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 30352 | || |||| | ||| || || |||||| || || || | | |||||| Sbjct 1615216 GGGGCAGGGAGGAGGTCGTG---CCGGAGATGAACCAGAGGAGTTCGGCGAGGACGGCGC 1615160 Query 30353 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | ||||| | |||||| ||||||||||| Sbjct 1615159 GCAGGAAGACGCGCTTGGTGGTGAGGAGGGG 1615129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617450599190