Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq24 159 6e-34 seq18 122 2e-22 >seq24 Length=3695433 Score = 159 bits (176), Expect = 6e-34 Identities = 374/557 (67%), Gaps = 12/557 (2%) Strand=Plus/Plus Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004 ||||| ||| |||| |||||||| | || ||| ||| || | ||| || Sbjct 1324428 TAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAG 1324487 Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 | |||| |||||| ||| | | || | || |||||| || ||||| ||||||| Sbjct 1324488 AACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGG 1324547 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 || | || ||||| | || | ||| ||||||| |||| ||| || | || |||| Sbjct 1324548 GCATAGAACAGATCGCGGG--CTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCA 1324605 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| || | || | |||||| ||||| || |||| ||| | ||| ||||| |||| Sbjct 1324606 GGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCT 1324665 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACC 222241 ||||||||||||| || || || ||| | |||||| | ||||| | || || Sbjct 1324666 TGTTGCCACCCTGGTCAACGTATCT-GGCAGTGTTGTTGAAAACCCGAAGCATGGGAACA 1324724 Query 222242 AGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG 222301 || |||||||| |||||||||||| |||||| | ||| | | || | | | Sbjct 1324725 AGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGC---GGATGCGG 1324781 Query 222302 -GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358 ||| || || |||||||||||| || |||||||| ||||| |||| | |||| Sbjct 1324782 TGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTG 1324841 Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA 222418 || ||| || || || ||||||||| | || | || || ||||| | | |||| Sbjct 1324842 TCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGA 1324901 Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | | || | || ||||| ||||| || || |||||| || ||||| | ||| Sbjct 1324902 GGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGAC 1324961 Query 222479 ATCAGATCGTACGTCTC 222495 |||| | ||| ||||| Sbjct 1324962 ATCAAGTGGTAGGTCTC 1324978 >seq18 Length=3504694 Score = 122 bits (134), Expect = 2e-22 Identities = 326/499 (65%), Gaps = 25/499 (5%) Strand=Plus/Minus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||||| ||||||||| | | ||| | | | || || | |||| || || || || Sbjct 126303 TGGGCCATTAAGTGGATCCAG-GACAGGGAGTCGACCTTCGCTCAGCGTCTCGTTGCTTT 126245 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||||| || ||||| ||||| ||| ||| || || || ||||||||||||||||| | Sbjct 126244 CGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAA 126185 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || |||||| || || ||| ||||||||||||||| | ||||||||||| Sbjct 126184 GCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCT 126125 Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGA 26072 |||| || || || |||||||| | | | |||| || | |||| | || | Sbjct 126124 GCACACCGACTTCGCTTGCCTGCTGTTCTC---CCACCTG----AACAACCGCCCCAGCA 126072 Query 26073 GACCGTCT-------ACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 || | | ||| |||| || ||||| || | || ||| ||||||| | Sbjct 126071 AACAGGTTGTTGAAGACATTATCGTC---GAGGCCGTCGGCATTGAGCAGGAGTTCCTGA 126015 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185 ||||||||||| || || ||| | || ||||| | Sbjct 126014 CTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCG 125955 Query 26186 AGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC-- 26242 ||| ||| || |||| ||||| ||| | || || | | ||||| |||| Sbjct 125954 AGTTTGTCGCGGACCGCCTGCTGGTGGC-CCTCGGCAACAAGAAGTACTACA--ACGCCA 125898 Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302 | ||||| |||||||| ||||| || ||| ||| || |||||||||||||| || | Sbjct 125897 CCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGA 125838 Query 26303 AGAGGGTCGGCGACTATCA 26321 || |||| || ||||| || Sbjct 125837 AGCGGGTAGGAGACTACCA 125819 Score = 93.3 bits (102), Expect = 8e-14 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || |||||||||||| || || |||||| Sbjct 126716 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTG 126657 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| || ||| |||| | ||| || | | ||||||| | || || Sbjct 126656 TCCAAGGATTTGCACGACTGGCACAACCGC-CTGAACGACGACGAGCGCTACTTCATCTC 126598 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || ||||| ||||| || || |||||||| || |||| | Sbjct 126597 CCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCG 126538 Query 25653 ATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || || || | | ||||| || |||||||| |||||||| Sbjct 126537 CTTCAGCGGCGAGGTCCAGGTTCCT-GAGGCTCGTTGCTTCTACGGATTCCAGAT 126484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844451683200