Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq18 145 1e-28 seq24 107 3e-17 seq23 104 4e-16 >seq18 Length=3504694 Score = 145 bits (160), Expect = 1e-28 Identities = 182/250 (73%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||||||||| ||| | | Sbjct 125805 TGACACCAGCCTTCTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCA 125864 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 125865 GCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGA 125924 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| ||||| || || |||||||| ||||| || || ||||| Sbjct 125925 GGGCCACCAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCA 125984 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || |||||||| | || | | ||||| | ||| || ||||||||| Sbjct 125985 TGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCT 126044 Query 794131 CGATGATGAT 794140 ||| ||| || Sbjct 126045 CGACGATAAT 126054 Score = 105 bits (116), Expect = 1e-16 Identities = 140/192 (73%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| ||| ||| || |||||||| || ||||| Sbjct 126127 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTT 126186 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| | ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 126187 CTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAA 126246 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||| |||| || || ||| | |||| | | ||||||||| || ||||| Sbjct 126247 AGCAACGAGACGCTGAGCGAA--GGTCGACTCCCT-GTCCTGGATCCACTTAATGGCCCA 126303 Query 794520 CTCTGCCTTTTT 794531 || ||||| || Sbjct 126304 ATCGGCCTTCTT 126315 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| |||||| ||||| ||||| ||||||||||| ||||||||||| || || Sbjct 126421 GGCTCCTTGATGTAGGTATCGATCAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATC 126480 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||| || || ||||| Sbjct 126481 ATGATCTGGAATCCGTAGAAGCA 126503 >seq24 Length=3695433 Score = 107 bits (118), Expect = 3e-17 Identities = 172/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 2071766 AGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAA 2071825 |||||||||| || || | |||| | || || ||| || || ||| ||||| | Sbjct 1324429 AGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGA 1324488 Query 2071826 AGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGC 2071885 | || | |||||||||| | | | || || ||| ||||| || ||||||||| Sbjct 1324489 ACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGG 1324548 Query 2071886 CGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCC 2071945 | || || |||||||| || | | ||||||||| ||||||||||| ||||| || Sbjct 1324549 CATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGA 1324608 Query 2071946 AGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGC 2072005 | |||| || || | |||||| ||||| |||||| |||||| || || |||||| Sbjct 1324609 ACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGT 1324668 Query 2072006 CGCCGCC 2072012 ||| || Sbjct 1324669 TGCCACC 1324675 Score = 93.3 bits (102), Expect = 7e-13 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| ||| || || || |||||||| ||||| |||||||| Sbjct 1324676 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 1324735 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| | | ||| | || | | ||| | |||| || | || Sbjct 1324736 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 1324795 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||| | ||||||||| | ||||| | |||| || |||||||| || || Sbjct 1324796 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 1324855 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755 || ||| |||||||||| | || ||||| || Sbjct 1324856 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGA 1324891 >seq23 Length=3271484 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| |||||||||||||| ||| || || || | || ||||| ||||| || ||| Sbjct 2419405 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAAC 2419464 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || || || |||||||||||||| |||||| || ||| Sbjct 2419465 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 2419519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243208763170