Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq18 179 4e-40 seq24 140 3e-28 seq7 125 7e-24 >seq18 Length=3504694 Score = 179 bits (198), Expect = 4e-40 Identities = 345/505 (68%), Gaps = 9/505 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || || ||| ||| ||| || | Sbjct 125818 CTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 125877 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | || ||||| Sbjct 125878 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 125937 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 |||||||| |||||||| ||||||| ||||| || | |||||||||||||| || Sbjct 125938 GCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGC 125997 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || |||| || || | ||||||| ||||||| | || ||||| || ||| | Sbjct 125998 AACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATAATGTC 126057 Query 120591 --GAGCATAGTG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 | || || | || ||| |||| | | || | | | | |||||| || Sbjct 126058 TTCAACAACCTGTTTGCTGGGGCGGTTGT-TCAGGTGGGAGAACAG-----CAGGCAAGC 126111 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 ||||| |||||||| |||||||| || || || ||||||||| || || || || || Sbjct 126112 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGG 126171 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| || | |||||| |||| |||| || ||| ||| || ||||| | || Sbjct 126172 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACC 126231 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 ||| ||| || || || || | |||| || || |||| | | || | |||||| Sbjct 126232 CTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTGGATCCA 126291 Query 120828 CTTCATGGCCCACTCGGCCTTTTTG 120852 ||| |||||||| |||||||| ||| Sbjct 126292 CTTAATGGCCCAATCGGCCTTCTTG 126316 >seq24 Length=3695433 Score = 140 bits (154), Expect = 3e-28 Identities = 592/922 (64%), Gaps = 26/922 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 ||||| ||||||||||||||| |||||||| || ||||| | | || || |||| Sbjct 1323368 GACTGAGACTGGTCAATGAACGCACCACGGTCCGCTGCCATCTGCAGGATCGTCCGCT-- 1323425 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 |||||||| |||||||||||||| |||||| | | ||| ||| | |||| Sbjct 1323426 -GGGAGATCTCCCACACCGTCTTGTACAGCGCCTTGATGTCACTGGGGATGTTGGGGATG 1323484 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| || || || | | |||| || | || ||| | ||||| | ||| | Sbjct 1323485 TTCTGGACGGAACCACCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCG 1323544 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || |||| |||||| | | ||| | | || |||||||| ||||| || || | || Sbjct 1323545 AGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACCACCTGGAACTCACCAGCCAAGACA 1323604 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || || | |||| || | || || || |||||||| |||||| ||||| Sbjct 1323605 CGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGA 1323664 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 ||| | || ||||||||| || ||||||| |||||| | ||| | Sbjct 1323665 CTGGTACTGGCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCG 1323724 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || ||| ||| ||||| |||||||||||||| | || || || |||||||||| Sbjct 1323725 ATCTTGGCCTTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCG 1323784 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||| || || || || | || |||||||| | ||| | |||| | || Sbjct 1323785 TACTGAAGGATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCC 1323844 Query 148530 GCCGCCAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 || || ||| | || || | | | ||| || || |||||| || || | Sbjct 1323845 TTGGCGAGATCGGACGAGGCGGTCAAAC-CAGCGTGATAGATGGTCTCGAAGATCTGGAT 1323903 Query 148589 GTTGAGCAG---CGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||| ||| | ||| | | | | ||| | |||| || || | || || || Sbjct 1323904 GTTCAGCTGTCTGGCCTCGGCCGAG---TCGAAGGGCAGGCGGAGAGCGAGGAAAGCATC 1323960 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 || || || | || |||| ||||||| ||||| | |||||| || Sbjct 1323961 AGCCAGACCGTTGACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGCCTC 1324020 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG 148764 | || || |||| |||| ||||||||||||| ||||| || || |||| |||| Sbjct 1324021 CGGGACGGGGTAGTAGTTGATGTCGATGATCTTGTTCAAG-TTACGGACCAAGACCTGGA 1324079 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCG------GT--T 148816 | | | ||| |||| || |||| | | | | | |||||| || Sbjct 1324080 CGACCTCGTGGAGCTTGCCAAAGTCATACTCG-CCGCGA-GCAGCATCGACGAAAGTAGG 1324137 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 | ||| | |||||| || ||||| || || ||||||||| || |||||||| | ||| Sbjct 1324138 AAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGAT 1324197 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 ||| | ||| || ||| || ||| || | |||||| || |||||||| |||| Sbjct 1324198 CTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTT 1324257 Query 148937 GCACGCGTCCTTGTACAGCATG 148958 ||| || ||||||||||||||| Sbjct 1324258 GCAAGCATCCTTGTACAGCATG 1324279 Score = 113 bits (124), Expect = 4e-20 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | | |||| | | | ||||| |||||||| || Sbjct 2677441 GTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCA-TCCTCCAGCTGCTTTCC 2677499 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||||||||||||||| ||||| || |||||| ||| Sbjct 2677500 GGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTT 2677559 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || ||| ||| ||| || |||| ||||| ||| |||||||| Sbjct 2677560 GACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 2677613 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| || || | | | ||||| | |||||| || Sbjct 2676912 GTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCCTCCAACTGCTTACC 2676970 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || ||||||||||||||||| ||||| ||| Sbjct 2676971 AGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGGTCTT 2677030 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| | || || || | |||| || || || || ||||| Sbjct 2677031 AACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGT 2677090 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 2677091 CTTGACGAAGATCTGCAT 2677108 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||||||| | ||| | | | || || | |||||| || ||| Sbjct 2676689 CTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCA-TCTTCCAACTGCTTACCAGCGA 2676747 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | ||||| ||||||||||| || || ||||| ||||| || ||||| ||||| | Sbjct 2676748 AGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGT 2676807 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| || || | | |||||| || | || | || |||||||| ||||| || | Sbjct 2676808 TATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCA 2676867 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 2676868 CGAAGATCTGCAT 2676880 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || ||| | || || ||||||||||| || || ||||| |||||| Sbjct 2677182 TCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 2677241 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||| | | || | ||||| | | |||||| || | ||||| | Sbjct 2677242 TCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATG 2677301 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || || |||||||| || || |||| Sbjct 2677302 GTCTTTCCGGTCAGGGTCTTGACGA 2677326 >seq7 Length=6264467 Score = 125 bits (138), Expect = 7e-24 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||||| ||| |||| || |||| || |||||||||||||||||| ||| ||| Sbjct 5412355 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 5412414 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| |||| || |||||| || ||| | | || || ||||||||||||||| Sbjct 5412415 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCACGTCGGTGAC 5412474 Query 116596 CTGGGCAAC 116604 || |||||| Sbjct 5412475 CTTGGCAAC 5412483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420618717200