Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21]
30 sequences; 36,450,809 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq18 134 2e-26
seq24 129 7e-25
seq7 82.4 9e-11
>seq18
Length=3504694
Score = 134 bits (148), Expect = 2e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| |||||||||||||| |||||||| || || |||||| ||||| |||||||||||
Sbjct 126121 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 126180
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||| | |||||| || | | || ||||| ||||||||||| ||||| ||
Sbjct 126181 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 126240
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 130205
||||| |||| |||||||| ||| |||| || | ||| | | |||||| || |
Sbjct 126241 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 126299
Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGAC 130236
|||| | ||||| || | || || |||||
Sbjct 126300 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 126330
>seq24
Length=3695433
Score = 129 bits (142), Expect = 7e-25
Identities = 367/561 (65%), Gaps = 5/561 (1%)
Strand=Plus/Plus
Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997
||||| ||||||||| || ||||| ||||| | | || | | || || || |
Sbjct 1324419 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 1324478
Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057
| |||||||| |||| ||| | || | ||||||| ||||||||||| || || ||
Sbjct 1324479 TTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGA 1324538
Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117
|||| || || |||| ||||| || | | || || | || || || |||
Sbjct 1324539 GTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGG 1324598
Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177
| |||| || || | || ||||| |||||| || || ||||| | || | | ||
Sbjct 1324599 AGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCG 1324658
Query 119178 TTACGACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234
||| ||| |||||| || || || |||||| ||| || || ||||||||
Sbjct 1324659 GGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATG 1324718
Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACA 119294
|||| | ||| | ||| || || || || | ||| ||| | | | ||
Sbjct 1324719 GGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATG 1324778
Query 119295 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 119354
||| | || || ||||||||| || || ||| ||||| ||||| | | | |
Sbjct 1324779 CGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAA 1324838
Query 119355 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 119414
|| ||||||| || || || ||| |||| | ||| ||||||||| | |
Sbjct 1324839 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGC 1324898
Query 119415 TGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TG 119473
|||||| ||| |||||||||||||| ||||| || | ||||| |||| ||| | ||
Sbjct 1324899 TGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTCTG 1324957
Query 119474 GGACATCTTGTCGTAGGTCTC 119494
||||||| || |||||||||
Sbjct 1324958 GGACATCAAGTGGTAGGTCTC 1324978
Score = 111 bits (122), Expect = 2e-19
Identities = 459/719 (64%), Gaps = 14/719 (2%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| |||| ||||| ||||| |||||||| ||| |||||||| || || |
Sbjct 1323614 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 1323673
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| ||||||||||| || | || | |||||| |||| ||| | | || ||
Sbjct 1323674 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 1323733
Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361
|||||||| ||||||| || | | | | | |||||| || |||| |||
Sbjct 1323734 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 1323793
Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421
||||| ||||| | || |||||||| | ||||| || | || ||| || |
Sbjct 1323794 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 1323853
Query 118422 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGC 118480
||||| || | | |||||||| || || || || || | |||| ||
Sbjct 1323854 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 1323913
Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540
|| ||||||| | || || || | || ||| | || |||| || ||||| |
Sbjct 1323914 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 1323972
Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGG 118597
|||||| || |||| || || || | | || |||||| || |||| |||||
Sbjct 1323973 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 1324029
Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657
|| | || | ||||| | | | || | || | | |||| || || ||
Sbjct 1324030 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 1324089
Query 118658 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714
||||| | | ||| | | ||||| | ||| ||| | |||||||||| |
Sbjct 1324090 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 1324146
Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774
|| || || || || |||| ||||||| | || ||||||| || || || |||||
Sbjct 1324147 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 1324206
Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834
| ||| || || ||||| || | |||||| || || ||| |||| || |||||
Sbjct 1324207 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 1324266
Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893
|||||| |||||| | || | || ||||| || || | || |||||||| | |||||
Sbjct 1324267 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGA 1324325
>seq7
Length=6264467
Score = 82.4 bits (90), Expect = 9e-11
Identities = 165/239 (69%), Gaps = 12/239 (5%)
Strand=Plus/Minus
Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG--TTGATTTTCACGGGCAA 14291
||||||| || ||||||||||||||||| | || || || | ||||| | || |
Sbjct 4709461 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 4709405
Query 14292 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 14349
|| | || | ||| || |||| | ||||||||| ||||||||||| ||||| |
Sbjct 4709404 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 4709346
Query 14350 GG--CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGG 14407
| | | | ||| | || |||||| ||| |||||||| || |||| ||| ||
Sbjct 4709345 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 4709288
Query 14408 AGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
| ||||| || || || || || | |||| ||||||||| ||||| |||||||
Sbjct 4709287 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 4709229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434968086800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |